Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0350 ATGTCATCAGTATCACCAATATCAATATCATCATCAAGGCTTTTTGACACCATCAGTGAATGCCTCTCCCAGCTGCAGGCTCCTCAATCATCAGATTCCCAGCTTGAAGTTCAGGAGAAAGCCCTTCAAACGCTGGCTTCCATAACCAAAGTCAGTCCCCAAAACAGAACCTTGGTGGCTCAAACAGATGGAGTTATCCAAACACTTTCCACACTACTCACAAACACCTCCTCCTCCCCAACCATCCAAACCCTTTCCTCGTTAACCCTCTTCAACCTCTCCCTCAACCCTGATCTCAAGCACTCTCTTGCTGACATGCAAACCATTCACCACCTCAATTCCCGCATTTGCTGCAGCAGCACCACCACCCCATCATCTGATTATTCCTCCAAACTGGCCTCCTCATTGATCTGCAGCTTGGCCATGCATGACAAAAACAAGGCCAAATTCGGTGTTGCAGGCACTGTTCAGTTGCTTGTGAAGGCCATTGAAGCCTCTCTTCATGAAAAAGAATGTTCTGACGATGCTCATCACCACCACCTCCTGAGTTCTCTTGCTGAGCTTGTTCAGTTCCATGGGAACTGCACTTTGGCTGTGAGAGCAGGTGCAGTTCCTGTGCTGCTTGGAGTTGTGAAGAGCACTGAAAGTGAGGACTTGGCTGCAACTTCTCTTGCTGCTCTTGGCCTCCTTGCGAGGTTCGATGAAGGGCTGAATGGTCTCAAGAGAAGTGATAGTGAGATAATGAGTGCCATGTTGAGTGTGCTGAAAGGGAGGTCCTTGTTGAGCAAGGAAGGTGCGGCTGATATACTTCTTCGCCTCTTTGATGACTCCGAAGGATGCATCAATGAGGCTCTGATGTTGCCGGAATTCTCGACGGCGTTGGCTGATCTTTCTGTGAGGGGATCGGCCAGAGTTCGAGGCAAGGCTGATCTGCTGATGAGGAAGATGGCTGAGGTGAGCTTAGCTGCTAACGTGGTGGAACCAAGCTCCATATTTGTGTAA 1002 0.493 MSSVSPISISSSRLFDTISECLSQLQAPQSSDSQLEVQEKALQTLASITKVSPQNRTLVAQTDGVIQTLSTLLTNTSSSPTIQTLSSLTLFNLSLNPDLKHSLADMQTIHHLNSRICCSSTTTPSSDYSSKLASSLICSLAMHDKNKAKFGVAGTVQLLVKAIEASLHEKECSDDAHHHHLLSSLAELVQFHGNCTLAVRAGAVPVLLGVVKSTESEDLAATSLAALGLLARFDEGLNGLKRSDSEIMSAMLSVLKGRSLLSKEGAADILLRLFDDSEGCINEALMLPEFSTALADLSVRGSARVRGKADLLMRKMAEVSLAANVVEPSSIFV* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0350 333 PANTHER KINESIN-ASSOCIATED PROTEIN 9 319 - -
Dod09g0350 333 PANTHER U BOX DOMAIN-CONTAINING 9 319 - -
Dod09g0350 333 SUPERFAMILY ARM repeat 14 316 IPR016024 -
Dod09g0350 333 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 64 94 IPR000225 GO:0005515
Dod09g0350 333 Gene3D - 2 285 IPR011989 -
Dod09g0350 333 SMART arm_5 52 95 IPR000225 GO:0005515
Dod09g0350 333 SMART arm_5 191 232 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0350 16 320 U-box Gene Family AT2G28830 26.433 4.39e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0350 - - gmx:121174819 388.267