Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0348 ATGGATCATCCTCTGATAAACGACGCTACATTCTCAGCGGCTAACCCTTCCGCATACACGCTCTCCGAGATTTGGCCATTCTCTGTTACCGACGGAGGATTGGGCCTCCGCATGCCCAATTTAGGAGGAGGAGGAGGAGGCGGAGGAGGTTGCAATGGTAATTTCACTCCCTATCCCGACGCCTCCCATTCCCCCCTCCTCCGAGATGCCTCCGCCGACGAGTCCACCCTTACCGACCAGAGCGCCGCCGCCACCGCCACCAGGAAGAATCAGCGCAAGAGGAGGAAGGACAACGCCGCCTCCGAGGATGACTCCTCCAAGATGGTTTCCACCAGCAGCGCCAACAACGAGGTGGATGATTATGACAATAAACGGATAAAATTAGGAGCATCCACCGATGGAAATGATGGTTCAAAAGCAGAAGCAGAAGCAAGTTCAGCAGCTGGTACCAAGTCAGCTGAAAAAAACGCTAAACCTTCTGAGCCACCTAAGCAAGACTATATTCATGTGAGAGCAAGAAGGGGCCAAGCTACCGATAGCCACAGTCTAGCAGAGAGGGCAAGAAGGGAAAAGATCAGTGAGAGGATGAAAATTCTTCAGGATTTGGTCCCAGGGTGTAACAAGGTAATTGGTAAAGCCCTTGTCCTGGATGAGATAATCAATTACATCCAGTCACTGCGGCATCAGGTTGAGTTCCTTTCAATGAAGCTTGAAGTTGTTAATTCAGGATTGAACATGAACCCTACTGTTGAAGGGCTCCCTTCAAAAGATGTTGGTACTCAGCCATTTGACTTGGCTGGAATGATATTTGGATCACAAGCAGCTAGGGGGTATGCTCAGGGAACACAACCTGGATGGCTGCATATGCAGATAGGTAGTGATTTTGGGAGAGAAACATAG 900 0.5011 MDHPLINDATFSAANPSAYTLSEIWPFSVTDGGLGLRMPNLGGGGGGGGGCNGNFTPYPDASHSPLLRDASADESTLTDQSAAATATRKNQRKRRKDNAASEDDSSKMVSTSSANNEVDDYDNKRIKLGASTDGNDGSKAEAEASSAAGTKSAEKNAKPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLRHQVEFLSMKLEVVNSGLNMNPTVEGLPSKDVGTQPFDLAGMIFGSQAARGYAQGTQPGWLHMQIGSDFGRET* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0348 299 MobiDBLite consensus disorder prediction 69 87 - -
Dod09g0348 299 MobiDBLite consensus disorder prediction 157 187 - -
Dod09g0348 299 Pfam Helix-loop-helix DNA-binding domain 180 226 IPR011598 GO:0046983
Dod09g0348 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 176 226 IPR011598 GO:0046983
Dod09g0348 299 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 9 299 IPR024097 GO:0006355
Dod09g0348 299 PANTHER BNAC05G07950D PROTEIN 9 299 - -
Dod09g0348 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 174 245 IPR036638 GO:0046983
Dod09g0348 299 SMART finulus 182 232 IPR011598 GO:0046983
Dod09g0348 299 Gene3D - 173 247 IPR036638 GO:0046983
Dod09g0348 299 MobiDBLite consensus disorder prediction 52 187 - -
Dod09g0348 299 CDD bHLH_AtBPE_like 166 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0348 Dod-Chr9 5229416 5236653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0348 1 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 54.636 1.32e-87 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod09g0348 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0348 - - zju:107418528 343.969