Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0333 ATGATCAAACATCACGTGAGCTCTTTCTTCATTCACAGGTTAGATGATGAACTCATGGAAACACTCTTTGGATATTCAACCAACTACAGAACTCAAGAAAGAAACAAAAGTCTTTCAACTTTAGCAATGTCCAATTCCAGCACACCAACTCAAATATTAATTCTGGAGCCAAGAAAATCCCAAAACACTGCTATTGTGTTAAGATCACTTGCCATCTCCCGCAAGGGAGTCTTGCATGCACTGCTTGATGGTCAGGGACTCAGTGTTGAGACACTTGAAAGACTCACAAAAATAGCTCCTACACTAGAAGAAGAAGCCAAGATCATGGAATTCAGTGGCAGCCCGGATAAACTTGCTGATGCTGAATCCTTCCTCTACTGCATCCTGAAAGCAGTTCCAACAGCATTCAATCGCTTGAAAGCAATGCTTTTCAGGTCAAGTTATGACTGTGAAGTTCTTCAGCTTAAAGAGCACCTACAGGCAATTGAAAAGGGTTGCAAAGAACTGAGGACTAGTGGTCTGTTTTTGAAGCTGCTTGAGGCCATTCTCAAAGCTGGGAACCGGATGAATGCTGGAACTTCAAGGGGCAATGCACAAGGTTTCAACCTGAGTTCTCTTAGAAAACTCTCTGATGTGAAAAGCACTGAGGGGAAGACTAGTTTGCTTTACTTTATAGTGGAACAGGTAGTTCAATCAGAAGGGAAAAGACAAGCTATATATCAAAGGCACAATCTTTACAGAAGCAAAAGCAATGGCAATAGACCATATTTAGATAGCCAAATACAACAAGAGGGTGACAAAGAATATCTAATGCTTGGTTTGCCAGTGTTAGGTGAGTTAAGTGATGAGTTATCTGAAGCAAAGAAAGCAGCCGGAATAGAGTATCACAGTTTCATTACTATGTGTTCAACTCTCAGTGCTCATGTTATGGAAATTAGGCAGATTATAACATGCTGTGGAAACACTGAGAGAGGTGGATTTATCAGGGAAATGAAAGGGTTCCTAGAGCAATGTGAGGGGGAGCTCAAGGTTGTGAAAGAGGAGCAGACAAGGATCATGGAGCTTGTGAGAAAAACCAATGATTATTATCTAGCAGGAGCATCCAGAGACAATTTGTCAAACCCCTTTCAACTGTTTGTGATTGTAAAAGAGTTTGTTGACATGGTAGGTCAGGCTTGCATAGAACTTAAAAGGAAGCTAGAAAAGAAGACTGTAGGAGCAGAAGCTGTATCAACACCACCTTTGTCACCATCAAAGAGGTTACCACACAGATTCCCAAACTTAGATTTGTATTTTCCGTCAAAAATGTCAGAAACTACTTCTTTCAGTCAATCAGAAGACGGCTTCTGA 1350 0.4104 MIKHHVSSFFIHRLDDELMETLFGYSTNYRTQERNKSLSTLAMSNSSTPTQILILEPRKSQNTAIVLRSLAISRKGVLHALLDGQGLSVETLERLTKIAPTLEEEAKIMEFSGSPDKLADAESFLYCILKAVPTAFNRLKAMLFRSSYDCEVLQLKEHLQAIEKGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSSLRKLSDVKSTEGKTSLLYFIVEQVVQSEGKRQAIYQRHNLYRSKSNGNRPYLDSQIQQEGDKEYLMLGLPVLGELSDELSEAKKAAGIEYHSFITMCSTLSAHVMEIRQIITCCGNTERGGFIREMKGFLEQCEGELKVVKEEQTRIMELVRKTNDYYLAGASRDNLSNPFQLFVIVKEFVDMVGQACIELKRKLEKKTVGAEAVSTPPLSPSKRLPHRFPNLDLYFPSKMSETTSFSQSEDGF* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0333 449 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 415 IPR015425 -
Dod09g0333 449 Pfam Formin Homology 2 Domain 15 389 IPR015425 -
Dod09g0333 449 PANTHER FORMIN-RELATED 13 444 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dod09g0333 449 Gene3D Formin, FH2 domain 4 410 IPR042201 -
Dod09g0333 449 SUPERFAMILY Formin homology 2 domain (FH2 domain) 50 405 - -
Dod09g0333 449 SMART it6_source 1 404 IPR015425 -
Dod09g0333 449 PANTHER FORMIN-LIKE PROTEIN 13 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0333 Dod-Chr9 5013357 5014706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0333 14 447 FH2 protein (formin) Gene Family AT1G70140 47.500 2.48e-128 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0333 - - gmx:100819989 699.508