Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0331 ATGGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCCTGCGATGTTTTCAGGCAGACCTTCCCGGATGTTTCCGCACGTGAGCTGCACGTGCTTGCAGTTGATGACAGCCATGTTGATCGCAAGGTCATTGAACGCTTGCTCAAAATCTCTTCTTGCAAAGTGACGGTGGTGGAAAGTGGAACTAGGGCTTTACAATATCTGGGATTGGATGGAGAGAATAATAGTTCTGTTGGTTTTGATGGCGTGAAGGTTAATCTGATAATGACAGACTATTCAATGCCGGGGATGACAGGATTTGAACTCCTGAAGAAGATCAAGGAGTCATCTGTTTTTAGAGAGATTCCAGTGGTGGTTATGTCTTCTGAGAATATCTTGACCCGAATCGATAGTTGCTTGGAAGAAGGAGCAGAGGAGTTTCTGTTGAAACCTGTGAAGTTGGCTGATGTAAAACGCCTAACCGATTTCATCATGAAAGGTGAAGGGAAGAGAGCATGTAAAAGATATCAAAAAAGAAGGCGATCAGATGATTGCAGTCCTTCTCTATCTGCTGAACTTTCACCATTGTCGCCATCCATAGTGCCCTCAAAGAAATCTAGACTCTGA 615 0.4732 MAAAAAAAAAAAAAAACDVFRQTFPDVSARELHVLAVDDSHVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGENNSSVGFDGVKVNLIMTDYSMPGMTGFELLKKIKESSVFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLADVKRLTDFIMKGEGKRACKRYQKRRRSDDCSPSLSAELSPLSPSIVPSKKSRL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0331 204 ProSiteProfiles Response regulatory domain profile. 33 161 IPR001789 GO:0000160
Dod09g0331 204 MobiDBLite consensus disorder prediction 183 204 - -
Dod09g0331 204 Pfam Response regulator receiver domain 34 154 IPR001789 GO:0000160
Dod09g0331 204 Gene3D - 32 197 - -
Dod09g0331 204 MobiDBLite consensus disorder prediction 178 204 - -
Dod09g0331 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR 28 200 IPR045279 GO:0009736
Dod09g0331 204 CDD REC_typeA_ARR 34 156 - -
Dod09g0331 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 28 200 - -
Dod09g0331 204 SMART REC_2 32 157 IPR001789 GO:0000160
Dod09g0331 204 SUPERFAMILY CheY-like 31 161 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0331 Dod-Chr9 5006930 5009468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0331 18 176 Response Regulator Gene Family AT3G48100 75.472 1.14e-81 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod09g0331 Response_reg 1.9e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0331 K14492 - gmx:100306152 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1665 05 41920568 41923147 Dod09g0331 09 5006930 5009468 PCT