Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0311 ATGCATGGGCGTGGAGGTGAGGAGAGGAAAAGGAGGATTCGGCACATGTTTGTGACCGCCGATGTTTCTTCTTCTTCTTCGTCGTCGCCGCCAGCTAAGTCTTTCTGTAAGGACGGTCGTGAAATTAGTGTTGGTGAATGTGCTCTCTTCAGACCAACTCAAGATCGCCCACCTTTTGTTGGAATAATTCGTTGTTTGACGGTTGGTAAAGAGAATAAATTGAAGTTAGGAGTTAATTGGCTTTATCGACCCATTGAAGTAAAACTCGGCAAGGGCGTGCTATTGGAGGCTGCTCCAAACGAAATTTTCTACTCCTTTCATAAGGATGAGATTGATGCTGAATCGCTTCTTCATCCTTGTAAAGTTGCATTTCTTCCTAAAGGTGCTGAACTTCCATCAGGGATTTCTTCATTTGTGTGTAGGAGGGTTTATGACATTGCAAACAAGTGTTTATGCTGGCTAAATGATCAAGATTATATTAATGATTGCCAGGAAGTAGTGGATCAACTATTATACAAGACTCGTTTAGAAATGCATGCAACAGTGCAACCAGGTGGTCGATCTCCTAAGCAAATGAGTAGTCCAACATCAATGTCACAGTTAAAGTCTGGTTCAGACAGTGTCCAGAACAGTGCTTCTTCCTTTCCTTCTCACACTAAGGGTAGAAAAAGGGAGAGAGTAGATCAAGGCTCTGAGCCTGTGAAGCGAGAACGTTCAATAAAAAGTGAGGACGGAGATTCTCTTAATTTTAAGCATGATAGCTTCTTTAAGACAGAGATAGCCAAAATTACAGAAAAGGGAGCCCTTGTTGATACTGAAGGGGTTGAGAAATTAGTGCAGCTGATGGTTCCTGATAGAAATGAGAAGAAGATAGATTTATCTAGCCGGTCATTGCTTGCGGCTGTTATTGCAGCAACAGATAAAGAAGATTGTCTCAGTCAGTTTGTGCAGCTGAGAGGTTTGCCTGTATTTGATGAATGGCTCCAAGAAGTACATAAAGGAAAGATTGGTGATGGTATTGGGTCAAGGGATGGGGATAAGTCTGTTGAGGAATTTCTCTTGATATTACTTCGGGCTCTTGATAAGCTTCCAGTAGATCTTCAGGCTCTGCAGATGTGTAACATTGGTAAATCTGTGAATCATTTGCGATCCCATAAAAACTCTGAAATTCAGAGAAAAGCTAGGGGCTTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATATAAATGATGCAAAGTCTGGATCCGGTCAGAGTGTCCCCTGGGCTGCTAGGCAACGTATTCCTGAAGTTTCTCCAGGTGGGAATAGACATTCAGGTTCGTCATCTGATGTTGCCATGAAGAGTTCAGTTACACAGAATTCTGCATCCAAAACTGCCTCTGTGAAGGTCGTCCAGGGAGAAAATACTGCTAAATCTGCATCTCCAGGGCCTGCGAAAGCAGCGCTGTCACCTTCATCTGCTGCAACAAACTTAAAAGATGGACAGCCCCGTGTTGCTGCTGTCAGTGCAGGCTCCGATCTTGCTGTGGCAAATGCAAGGGATGAGAAAAGTAGCAGTTCTAGTCCATCTCACAACAATAGCAGTTCTAGTGACCATGCTAAAACTGGGGGTCTCTCTGGAAAGGAGGATGCCAGAAGCTCTACTGCAATGAGTGCAAATAAGATATCAGGAGGCTCTTCTCGGCATCGAAAATCTGTTAATGGATTCTCAGGTTCAACTCCACCTGGAGGGCAAAGGGAAACTGGGTCCAGCAGAACTTCCAACCTGCACAAAAATTCAAATTCAGAGAAAATATCTCAATCTGGATTAATGGAAAAGGCTCTTGATGGAGCTTCTCTTGATGGGAATACTCCCAAGCTGATTGTCAAAATTCCAAACCAAGGTCGAAGCCCCACACAAAGTGCTAGTGCCGGTTCTTTTGATGATCCTACGATCATGAACAGTCGAGCCTCATCTCTTGTCGTTTCAGGGAAGCATGATCAGTTTGATCGTGGCTCAAAGGAAAAGAGTGATTTTTATCGCGCCAACATTAGCTCGGATGTTAATACTGAATCTTGGCAGAGTAATGATTTCAAAGATGTATTGACTGGGTCTGATGAGGGTGATGGATCGCCTGCTGCAGTTACTGATGAAGAGCGCTGTAGGACTGATGATTGTAAGAAAACACTGGAAGGATCAAAAGCTGGTTCCTCATCATCTGGAAATGAAAACAAAGATGTGAATATGCGGGATGCTGCATACAGCTCCATAAATGCTTTAATTGAAGGTGTTAAGTACTCTGAAGCTGATGATGTTGGAATGAATCTTCTTGCTAGTGTGGCTACTGAAGAGATCTCCAAATCTGAATTGATGACAGCTGCTGGATCCCCAGAAAGAAACACTGCTACTGTTGAACAGTCAAGCATGGGCAATGGTGTAGTCAAGTCCTCTGAAGAAAATATTGTCCAGGGTGAATGTCTCTCAAATTTTGGACTTGGTGAACATAAGAATCCAGGTTCTATACTAGGTGATTCAGGGAAAAATGACGATAATATTTCTGGTTTGCCTTCTCCTGGAGGGAAAGCTGCAAGAGAGCATAATATGTGTATTAGTGGCATGGATTTGCCGCCTGTTACAGAAACTTGTTTAGAAAGCAAAGGAAAATTAAATGAAAAACCAGTTTCTATTTCACCATCTGGCCTTCCTGAAAGTGTTGCGCAAGAATGCAGAGATGGTGATGGCAGCAAGCGGCCACTGGAGGAGGTTGTGGGGGGAGTCAATGCAGGTGAAAACCGTGATGATAAGATCAGTGGTGCTGCAGGAGTTGAGGTGGGGGCAGTTGCAAAGCCGCCTTGTTCCTCTGCAGAAGTTGATGTAAAGGGTGATAACTGTACTGCTGAGGGATTAACCAGTGGACAGACAGCACAGAAGCCTCCTGCTATCCTTATGCAATCTGATTCTGTGAGAGGAACAGATGAGAATGTTCCTCATCGTTCTCGTTGCAGCATTGAAAAGGCTTCTGAAGATCTCAATGAGAAGGAATGTACGAATGACATGGCAACTGAGAATCATGCCAGTCAGTCTAAAAAGCAACAAAATGAGGGTGAAAGTGACACTTTGGCGATGCCTGGGAATAGAGGTTTATGTTCTGCTGTGACTGGTCTTGTCGCTGAACATGTGGAAGAGAATTCAGGATCGAAAGAGCTTCATGAACAAGCTGCTGGGCAGATACATCACAAAGCTCTACCTAGCTTTCCATCACAAGAAATGGATAAGCATCTGGATTCTAAAGGATCAAAGTTGTCTGCCATGGAAGCAGAGGAGGCTGAGGAGTGCACCTCTACCACTGCAGATACTACTTCCATGTCTGCTGCTGTTGTGTCAGATGTGGATGCAAAGGTTGAATTTGATTTAAATGAAGGGTTAAATGCAGATGATGGAAAGTATAGTGAGTTCAACAGCGTTGCCAGCTCGGGTATGTCTGCTATTCGATTGATCAGTCCTGTTCCATTTCTTGCTTCTTCTATGGCTAGTGGAATTCCCACCTCAATCACTGTGGCTGCTGCTGCAAAGGGGCGCTTTGTGCCGCCTGAAGATTTATTGAGAAGTAAGGGGGAGCTTGGTTGGAAGGGATCAGCCGCCACGAGTGCATTCCGGCCAGCTGAGCCTAGGAAAGTTATGGAAGTGTCGCATGGTACCCTAACTACAGCTATTCCTGATGCTGTAGTTGGAAAGCAGAGCCGACTTCCATTGGATATTGACCTAAATGTGCCTGATGAAAGAATACTTGATGATATCTCTCTTGCAGCCGATGGTCGTGATCATTTATCTAATAAAACTTCAGCTTCACCTGTTCGCTGCTCTGGAGGGCTTGGTCTTGACTTGAACCAAGTGGATGAAGCTTCTGATGTGGGCAATTGTTCCACTAGCAATTGTCATAAAATAGATGTTCCACTTATGCAGGTGAAATCATCATCCAGTGGTCCTGCAAAAGAAGTGAATGTCCAGAGGGACTTTGATTTGAACAACGGACCTTCAGTTGAAGAAGTCACCACTGAACCATCATCATTCTCTCAGCATGGCAGGAGCAGTGTGCCTTCTCAACCTCCTGTTTCTGGACTCAGGACGACTAATGCAGATCTAGGGAACTTCTCTTCATGGTTTCCCTCGGCTGGAAACACTTACTCTGCTGTCACAATATCTTCAATTATGCCTGATAGAGGGGGTCAACCTTTTTCAATCATTGGCCCTAACGGGTCACAAAGGTTGTTGGGTCCTGCTACTGGCGGCAACCCATTTGGACATGATATTTATCGGGGGCCGCCGGTATTGTCATCTTCTCCTGCAGTGTCTTATCCATCTGCTCCATTTGAATATCCTGTCTTCCCATTTAATTCCAGCTCCCCTCTTCCACCAGCATCATTTTCTGCTGGATCGAGTACTTATGTAGATTCAACATCGGGCAGTAGGATTTGCTTCCCTTCGGTAAATTCACAATTAATGGGGCCTGCTGGCACAGTTTCACCACAATACACCAGGCCTTTTGTTGTTGGCCTCCCAGATGGTAGCAACATTGGAAGTGCTGAGACCAGCAGGAAATGGGCAAGGCAGGGTTTAGATCTTAATGCTGGTCCTGGAGTCTCAGACATAGAGGGGAGAGATGAGAGTTCACATCTCCCACCGAGGCAACTTTCCGTTGCCAGCTCGCAGACCCTAGCAGAGGAGCGTGCTATGATGTTCAGCCTGACAGGTAGTGTTAAAAGGAAGGAGACCGATGGAGGGTGGGACGGCTACAAGCAGTCCTCATGGCAATAG 4803 0.4499 MHGRGGEERKRRIRHMFVTADVSSSSSSSPPAKSFCKDGREISVGECALFRPTQDRPPFVGIIRCLTVGKENKLKLGVNWLYRPIEVKLGKGVLLEAAPNEIFYSFHKDEIDAESLLHPCKVAFLPKGAELPSGISSFVCRRVYDIANKCLCWLNDQDYINDCQEVVDQLLYKTRLEMHATVQPGGRSPKQMSSPTSMSQLKSGSDSVQNSASSFPSHTKGRKRERVDQGSEPVKRERSIKSEDGDSLNFKHDSFFKTEIAKITEKGALVDTEGVEKLVQLMVPDRNEKKIDLSSRSLLAAVIAATDKEDCLSQFVQLRGLPVFDEWLQEVHKGKIGDGIGSRDGDKSVEEFLLILLRALDKLPVDLQALQMCNIGKSVNHLRSHKNSEIQRKARGLVDTWKKRVEAEMNINDAKSGSGQSVPWAARQRIPEVSPGGNRHSGSSSDVAMKSSVTQNSASKTASVKVVQGENTAKSASPGPAKAALSPSSAATNLKDGQPRVAAVSAGSDLAVANARDEKSSSSSPSHNNSSSSDHAKTGGLSGKEDARSSTAMSANKISGGSSRHRKSVNGFSGSTPPGGQRETGSSRTSNLHKNSNSEKISQSGLMEKALDGASLDGNTPKLIVKIPNQGRSPTQSASAGSFDDPTIMNSRASSLVVSGKHDQFDRGSKEKSDFYRANISSDVNTESWQSNDFKDVLTGSDEGDGSPAAVTDEERCRTDDCKKTLEGSKAGSSSSGNENKDVNMRDAAYSSINALIEGVKYSEADDVGMNLLASVATEEISKSELMTAAGSPERNTATVEQSSMGNGVVKSSEENIVQGECLSNFGLGEHKNPGSILGDSGKNDDNISGLPSPGGKAAREHNMCISGMDLPPVTETCLESKGKLNEKPVSISPSGLPESVAQECRDGDGSKRPLEEVVGGVNAGENRDDKISGAAGVEVGAVAKPPCSSAEVDVKGDNCTAEGLTSGQTAQKPPAILMQSDSVRGTDENVPHRSRCSIEKASEDLNEKECTNDMATENHASQSKKQQNEGESDTLAMPGNRGLCSAVTGLVAEHVEENSGSKELHEQAAGQIHHKALPSFPSQEMDKHLDSKGSKLSAMEAEEAEECTSTTADTTSMSAAVVSDVDAKVEFDLNEGLNADDGKYSEFNSVASSGMSAIRLISPVPFLASSMASGIPTSITVAAAAKGRFVPPEDLLRSKGELGWKGSAATSAFRPAEPRKVMEVSHGTLTTAIPDAVVGKQSRLPLDIDLNVPDERILDDISLAADGRDHLSNKTSASPVRCSGGLGLDLNQVDEASDVGNCSTSNCHKIDVPLMQVKSSSSGPAKEVNVQRDFDLNNGPSVEEVTTEPSSFSQHGRSSVPSQPPVSGLRTTNADLGNFSSWFPSAGNTYSAVTISSIMPDRGGQPFSIIGPNGSQRLLGPATGGNPFGHDIYRGPPVLSSSPAVSYPSAPFEYPVFPFNSSSPLPPASFSAGSSTYVDSTSGSRICFPSVNSQLMGPAGTVSPQYTRPFVVGLPDGSNIGSAETSRKWARQGLDLNAGPGVSDIEGRDESSHLPPRQLSVASSQTLAEERAMMFSLTGSVKRKETDGGWDGYKQSSWQ* 1601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0311 1600 MobiDBLite consensus disorder prediction 622 647 - -
Dod09g0311 1600 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1600 - -
Dod09g0311 1600 ProSiteProfiles BAH domain profile. 40 155 IPR001025 GO:0003682
Dod09g0311 1600 MobiDBLite consensus disorder prediction 694 743 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 786 809 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 1557 1572 - -
Dod09g0311 1600 Gene3D - 27 262 IPR043151 -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 437 475 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 1541 1600 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 886 914 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 181 245 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 789 809 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 835 859 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 728 743 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 1319 1372 - -
Dod09g0311 1600 Pfam BAH domain 42 148 IPR001025 GO:0003682
Dod09g0311 1600 SMART BAH_4 40 155 IPR001025 GO:0003682
Dod09g0311 1600 MobiDBLite consensus disorder prediction 515 603 - -
Dod09g0311 1600 CDD TFIIS_I 330 406 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 186 217 - -
Dod09g0311 1600 Coils Coil 999 1019 - -
Dod09g0311 1600 Pfam TFIIS helical bundle-like domain 356 405 IPR017923 -
Dod09g0311 1600 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 311 419 IPR035441 -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 1016 1035 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 1335 1372 - -
Dod09g0311 1600 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 273 409 IPR035441 -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 987 1015 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 430 603 - -
Dod09g0311 1600 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1600 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 629 647 - -
Dod09g0311 1600 SMART TFS2_5 328 407 IPR003617 GO:0005634
Dod09g0311 1600 MobiDBLite consensus disorder prediction 218 245 - -
Dod09g0311 1600 ProSiteProfiles TFIIS N-terminal domain profile. 331 408 IPR017923 -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 709 727 - -
Dod09g0311 1600 MobiDBLite consensus disorder prediction 964 1039 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0311 Dod-Chr9 4762726 4770426 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Dod09g0311 BAH 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0311 - - ccaj:109810746 2221.43