Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0309 ATGGCAAAGTCTCTTATGATCCTTAGCCTGCAGAACAACAGTTTGTATGATTCGGTATCAGAGGATATAGGGAACTGCAAGTCCTTGACTCACTTGTTTCTAAGTGGGAATCACTTCTCTGGAGAGCTTCCTTTCTCTATTTCACAACTGAATAACTTGAAGAGGCTTCATATTTCGGACAACAGCTTCTCTGGAGAGCTTCCAAACATGTCTGATCATGTTTCAGGCTTGATATCATTTCTTGCTGAAAACAATAACTTCACTGGGGAGATTCCTGATTTTGACTTCTCCAACCTTGAAGCGTTTAATGTCTCAAACAACAATTTAAATGGCCCAGTTCCTGATGTCAGCGGCAAATTCCATGCAGACAGCTTTTATGGTAATCCTGGTTTATGTGGAAAACCACTCCCAAATGCATGCCCTCCCACACCTTCTCCTCCTCCTCCACCACATGAGAAGAAAGGTTACTTAATTCTTGGTGCAATGGTCTTGCTTTTCTTTGTCCTCAAATTGGTTAGTAAATTCAAAACCAAAAAGGAAGCATTAGATGCTGAAAAGAAGGAGAAAGCAGAAGAAACTAGTGGTGACAAGCCTAGTGAAACTTCCAATAATATTAGTGGATCTAAGAGTGGTGTAAAATCCGAGTATTCATTGTCATCTTTGGAAAGTGGGGTGGCTTCATCTGGCCTTGTTGTCCTTTCAAGTTCAAAGTTTAAGGCATTGCAATTTGGGGAATTGCTCAGTGCTCCTGCTGAATTGGTCTGGAGAGGGAAGCATGGAAGCCTCTACAAGGTGATGCTAGACAATGGGGCTTTTTTGGCAGTCAAGAGGATCAAGGATTGGGGGATCTCAAAGCAAGATTTTGAGAGAAGGATGGAGCTTATAGTACAAGTGAAGCATCCAAGTGTACTGCCACTTGTTGCATATTATTGCTCCCAGCAAGAGAAGCTCCTGGTCTATGAATATCTGCAGAATGGCAGTCTCTTCATGCTTCTCTATGGGTCTCAACGTGGCCAGTCTTTTGACTGGGGGAGAAGACTAAATGTTGCTGCTAACATAGCTGAGGCCTTGGCACACATGCATGAGGAGATGTGTGGGAGTGGAATAGGACATGGCAACTTGAAATCAAGCAACATTTTGTTCGACAAGAACATGGATCCATTCCTAAGTGAATATGGCCTAATGGTTGCTGAAAATCAAGATCAATATGTCCTTTCCCACACCAAAAGGCTAAGAAACAGGAATCTGACTGCAGACACCTTCAAAGCTGATATATATGCCTTTGGTGTGATACTTCTTGAACTGCTGACAGGAAAAGTGGTGAAAAATGATGGGTTTGATCTTGCTAAATGGGTGAACTCAGTGGTAAGAGAGGAATGGACTGTTGAAGTTTTTGACAAGTCCCTAGTCACACAAGGTGCTTCTGAAGAGAGGATGATGAGCTTGTTGCAGGTAGCACTGAATTGCATAAATCCTTCTCCAAATGAAAGGCCAAGCATGAGTCAAGTTGCAATGATTACAAAAGCATTGAAAGAGGATGATGTAAAATCTGTAACATTTGAGGTTTGA 1569 0.4213 MAKSLMILSLQNNSLYDSVSEDIGNCKSLTHLFLSGNHFSGELPFSISQLNNLKRLHISDNSFSGELPNMSDHVSGLISFLAENNNFTGEIPDFDFSNLEAFNVSNNNLNGPVPDVSGKFHADSFYGNPGLCGKPLPNACPPTPSPPPPPHEKKGYLILGAMVLLFFVLKLVSKFKTKKEALDAEKKEKAEETSGDKPSETSNNISGSKSGVKSEYSLSSLESGVASSGLVVLSSSKFKALQFGELLSAPAELVWRGKHGSLYKVMLDNGAFLAVKRIKDWGISKQDFERRMELIVQVKHPSVLPLVAYYCSQQEKLLVYEYLQNGSLFMLLYGSQRGQSFDWGRRLNVAANIAEALAHMHEEMCGSGIGHGNLKSSNILFDKNMDPFLSEYGLMVAENQDQYVLSHTKRLRNRNLTADTFKADIYAFGVILLELLTGKVVKNDGFDLAKWVNSVVREEWTVEVFDKSLVTQGASEERMMSLLQVALNCINPSPNERPSMSQVAMITKALKEDDVKSVTFEV* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0309 522 PANTHER LRR RECEPTOR-LIKE KINASE 2 520 - -
Dod09g0309 522 MobiDBLite consensus disorder prediction 182 196 - -
Dod09g0309 522 Gene3D Transferase(Phosphotransferase) domain 1 323 520 - -
Dod09g0309 522 Pfam Protein kinase domain 256 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0309 522 PANTHER OS05G0588300 PROTEIN 2 520 - -
Dod09g0309 522 SUPERFAMILY L domain-like 4 135 - -
Dod09g0309 522 MobiDBLite consensus disorder prediction 197 212 - -
Dod09g0309 522 Gene3D Phosphorylase Kinase; domain 1 230 322 - -
Dod09g0309 522 Coils Coil 172 192 - -
Dod09g0309 522 MobiDBLite consensus disorder prediction 182 212 - -
Dod09g0309 522 SUPERFAMILY Protein kinase-like (PK-like) 252 505 IPR011009 -
Dod09g0309 522 Gene3D Ribonuclease Inhibitor 1 145 IPR032675 -
Dod09g0309 522 ProSiteProfiles Protein kinase domain profile. 248 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0309 Dod-Chr9 4744649 4746834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0309 5 511 Receptor kinase-like Gene Family AT1G48480 35.572 9.45e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod09g0309 Pkinase 8.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0309 - - gmx:100787974 690.263