Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0307 ATGGTGGCAAGATCATACGCGAATTTGTTGGACTTAGTGTCAGGGGATACTTTAGATATCCCTTCATCTCCGAGAGCACTTCCGCGTGTTATGACTGTTCCGGGAGTTGTCTCTGATGTAGAAGGCAAACTAAGCAATGACGATACTTTCCCATCAGAATACCATCACAGGATAATTATAGTAGCAAATTGTCTTCCTCTCAACGCTAAGAAGGATAAGATATCTGGAAAATGGTGCTTTAGTTATGATGAAGATTCGATTTTTTGGCAGTTAAAGGATGGTCTCCCTTCTGATGTCGATGTTGTTTATGTGGGATCCCTGATAGTTGATGTTGACATTAGTGAGCAAGAGCAAGTTTCTAATCAGTTGCTGGAGGAATTCAAATGTGTGCCTACCTTTATTCCTCCAGACCTCCATGAACAGTTCCATGATGGATTCTGCAAGCAACATTTGTGGCCTCTATTCCATTACATGTTGCCCATGTATCCAGGCTATAACAATCGCTTTGAGAGGTCGCTGTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCAGATAAAGTCATGGAGGTCATTAACCCAGAAGAAGATTATGTATGGGTTCATGATTACCATCTTATGGTTCTTCCAACATTTCTGCGCAAGCGATACAGCAGGATCAAGCTCGGTTTTTTCCTACATAGTCCATTTCCTTCATCAGAAATTTATCGAACTCTGCCTGTCAGGGGTGAAATTTTGAAAGCACTGCTTAATGCAGATTTAATTGGTTTTCACACATTTGACTATGCTCGCCATTTTCTGTCCTGCTGCAGTCGAATGCTTGGCTTGAAATATGCATCCAAAAGAGGATACATTGGGCTTGAATACGTTGGCCGTACAATATTCATCAAAATATTGCCTGCTGGGATTCATATGGGTAGACTTCAATCTGTCTTAGACCACCCTTCTTGTGCTAGCAAAGCCAGAGAAATCTACCAACAATTTAAGGGTAAAAAACTTATTGTTGGTGTTGACGATATGGACATCTTTAAAGGTATAAGTTTAAAGTTCATGGCCATAGAACAACTCCTGCAGCAATATCCAACACTACAGGGTGAATTAATAATGGTCCAAATTTTAAATCCTCCAAGGACCACTGCCAAAGATATTGAGGAAGAAAAGGAGGAGGCCTACATTACTGCTAAAAGGGTAAATGAAAGGTTTGGTGTGCCAGGTTATGAACCTATCATGATGATTGAGCGTCATGTTCCTTTCTATGAGAAGGCAGCCTATTATGCTATGGCAGAATGTTGCATTGTGAATGCGTTGCGGGATGGTATGAACTTGGTTCCATACAAGTACATTGTCTGCCGGCAGGGGAGTCCTAAAATGGATGAAGCCTTGGAAATTGCTTCTGACTTGCCCCGTAAAAGTGCACTTGTTGTTTCCGAGTTTATCGGTTGCTCCCCATCTCTTAGCGGGGCAATCAGGGCAAACCCGTGGGATGTTAATGCTGTAGCTGAAGCTCTAAATTTGGCTATCGGAATCTCCGATGTAGAGAAAAGGTTACGGCATGAGAAGCACTATCGATATGTTAGTTCTCATGATGTGGCTTATTGGGCCAAAAGTTTTGAGCGTGATCTAGTGTTGTCGTGCAAGGATCACAATAATAAACGTTGCTGGGGCCTTGGCTTTGGCCTGAATTTTCGAGTCCTGTCCCTGTCTCCTAATTTCAGGAAGCTCTCAATAGACCACATTGTCTCTGCATATAAAAGGACAACTTCCAGGGCAATCTTTTTGGATTATGATGGCACAGTTGTACCTCAATCTTCCATTGATAAAGCCCCCAGTACTGAAGTCATATCTGTGCTAAACAATCTTTGCAGTGATCCTAACAACACTGTGTTTATTGTTAGTGGCAGGGGGCAAACCTCATTGAGTGGATGGCTTGATCAGTGCGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTTACAAGGTGGGGTGGCCAGTCTAGTTGGAAAATGAGTCATGTAAGTACAGATTTTGCTTGGAAAAGGATTGCTGAGCCTGTGATGAGATCATATACTGAGGCCACAGACGGCTCCTATATAGAGACCAAAGAGAGTGCCTTGGTGTGGCATTATTGTGATGCCGATCCTGATTTCGGATCTTGGCAAGCCGCCGAGCTTTCAGACCACCTCGAGAGTGTACTTGCGAATGAGCCAGTGGTTGTGAAAAAGGGACAGCACATTGTTGAAGTCATGCTTCAGGGAATTACTAAAGGGTCAGTTGCACAGGATGTTCTGTCTACACTAACAAGCAGTGGGAAATCGCCGGATTTTGTGCTGTGCATCGGTGATGACAGATCTGATGAGGACATGTTTGAGAGCATATTAACCAAAGTTTATAGTTCAGACTCTTCTCCGGAACCAGAAATCTTTGCATGTACTGTAGGGCAAAAACCAAGCAAGGCTAGGTACTACCTAGACGATACTGCAGACGTGATGACGTTGCTTCAAGCTCTTGGTACTGATTCAGGGCCTAGATCATTATTTTCTGCAGCAGCACCTTCCGAAAACGTGAAAGTCTGTTTTGAGAATGTAGTTTGA 2592 0.4302 MVARSYANLLDLVSGDTLDIPSSPRALPRVMTVPGVVSDVEGKLSNDDTFPSEYHHRIIIVANCLPLNAKKDKISGKWCFSYDEDSIFWQLKDGLPSDVDVVYVGSLIVDVDISEQEQVSNQLLEEFKCVPTFIPPDLHEQFHDGFCKQHLWPLFHYMLPMYPGYNNRFERSLWQAYVSANKIFADKVMEVINPEEDYVWVHDYHLMVLPTFLRKRYSRIKLGFFLHSPFPSSEIYRTLPVRGEILKALLNADLIGFHTFDYARHFLSCCSRMLGLKYASKRGYIGLEYVGRTIFIKILPAGIHMGRLQSVLDHPSCASKAREIYQQFKGKKLIVGVDDMDIFKGISLKFMAIEQLLQQYPTLQGELIMVQILNPPRTTAKDIEEEKEEAYITAKRVNERFGVPGYEPIMMIERHVPFYEKAAYYAMAECCIVNALRDGMNLVPYKYIVCRQGSPKMDEALEIASDLPRKSALVVSEFIGCSPSLSGAIRANPWDVNAVAEALNLAIGISDVEKRLRHEKHYRYVSSHDVAYWAKSFERDLVLSCKDHNNKRCWGLGFGLNFRVLSLSPNFRKLSIDHIVSAYKRTTSRAIFLDYDGTVVPQSSIDKAPSTEVISVLNNLCSDPNNTVFIVSGRGQTSLSGWLDQCENLGIAAEHGYFTRWGGQSSWKMSHVSTDFAWKRIAEPVMRSYTEATDGSYIETKESALVWHYCDADPDFGSWQAAELSDHLESVLANEPVVVKKGQHIVEVMLQGITKGSVAQDVLSTLTSSGKSPDFVLCIGDDRSDEDMFESILTKVYSSDSSPEPEIFACTVGQKPSKARYYLDDTADVMTLLQALGTDSGPRSLFSAAAPSENVKVCFENVV* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0307 863 Gene3D - 671 751 - -
Dod09g0307 863 Gene3D Glycogen Phosphorylase B; 310 526 - -
Dod09g0307 863 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 845 - -
Dod09g0307 863 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 590 791 IPR006379 -
Dod09g0307 863 Pfam Glycosyltransferase family 20 57 541 IPR001830 GO:0003824|GO:0005992
Dod09g0307 863 Gene3D Glycogen Phosphorylase B; 50 309 - -
Dod09g0307 863 CDD HAD_TPP 590 830 - -
Dod09g0307 863 Pfam Trehalose-phosphatase 592 826 IPR003337 GO:0003824|GO:0005992
Dod09g0307 863 Gene3D - 591 823 IPR023214 -
Dod09g0307 863 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 845 IPR001830 GO:0003824|GO:0005992
Dod09g0307 863 CDD GT20_TPS 57 541 IPR001830 GO:0003824|GO:0005992
Dod09g0307 863 Coils Coil 380 400 - -
Dod09g0307 863 TIGRFAM T6PP: trehalose-phosphatase 589 836 IPR003337 GO:0003824|GO:0005992
Dod09g0307 863 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 57 541 - -
Dod09g0307 863 SUPERFAMILY HAD-like 589 837 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0307 Dod-Chr9 4724072 4731426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0307 1 863 Trehalose Biosynthesis Gene Families AT1G23870 66.551 0.0 1237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0307 K16055 - gmx:100812031 1430.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1638 05 41565475 41568151 Dod09g0307 09 4724072 4731426 PCT