Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0303 ATGAACAGCGACTTCCACCGCTTCGCGGTCTCTTCCCGCTTCCGCACCCGTTTCCCAAAGCCCTTCTCCCTCCGCAAGAAGGTTCCATGGTGGTACCAAATCCTTGACCCTCGTTCCGAGTTCGTCGCACGTTGGCACCGCACGTTCCTCTACGCTTGCATTGCCGCGCTCTTCCTCGACCCTCTCTACTTCTATTTCCCAATCACCGGGGACGAGGCTTGCATGCAGACGGATTTGGTCCTCGGCGTGTTCGTCACGTTCTCAAGAACCGTTGGTGACCTCTTCTTCGTCTTCCACATGGTCCTCAAGTTCAGGACCGCGTTTGTGTCCCCTACTTCCCGTGTTTATGGCCGCAAGGAGCTTGTTACGGATCCCGAACAGATTGCCATTCGCTACCTCAAGTCCGATTTCATCATCGATTTCCTTGCCACCCTTCCTTTGCCTCAGATTGTGATTTGGTTCGTGGTTCCAGCGGTGAAAAACTCAACGGCAGCTCATGCAAATCACACATTGTCCTTGATTGTCCTCATTCAATATATTCCACGGTTGTTTCAGATTTTTCCCCTTCAACGGCGAATCTTAAAGACTAGTGGGCTTATAACCAAAACTGCACTGGCAGGAGCAGTGTACAATCTTGGTTTTTACATGCTGGCTAGCCATGTTTTAGGAGCATCATGGTATGTGTCATCCATTCAACGGCAATACGAGTGTTGGAGAATAACTTGCAGGCAGGAGATGAACGGAACGCACTCTCCATCTTGCGACCTTTCGTTTCTGGATTGTGCTAGTTTGGACGAGCCCGAAAGGCAAGCTTGGTTTTCGCGCACCAGAGTGCTCACTGATTGCGACGCCCTCAATGATCAAAGCTTTCAGTTTGGAATGTTCGCTGATGCTTTCCTTGATCAAGTCTCTTCTGCAAGATTCATCCAAAAATATTTTTACTGCCTCTGGTGGGGCTTGAAAAGTCTAAGTTGTTATGGACAAAATATTAAGACGAGCACATACGTTGGTGAAACATTATTTTCAATTTTCATCTGCATCGCAGGGAAAGAGAGCATTTACTACACAATTATGGACCCAGATGATGATTATGAGGAAGCAGGTTTAGGAGAGAGTTCAATGGGGGACAATGGAGGCCATGGACTGAACCTCGGGGTCACAGTTTTGGCCTCAAAATTTGCTGCAAACACTAGAAAAGGTGCAGTTAAAAAGGTTACAATACCTGATAGTGACAGTTTGAAGATGCCCAAGATGTTCAAGCCAACAGAGCCTGATTTCTCAACATTCCCTGAAGATTAG 1299 0.4765 MNSDFHRFAVSSRFRTRFPKPFSLRKKVPWWYQILDPRSEFVARWHRTFLYACIAALFLDPLYFYFPITGDEACMQTDLVLGVFVTFSRTVGDLFFVFHMVLKFRTAFVSPTSRVYGRKELVTDPEQIAIRYLKSDFIIDFLATLPLPQIVIWFVVPAVKNSTAAHANHTLSLIVLIQYIPRLFQIFPLQRRILKTSGLITKTALAGAVYNLGFYMLASHVLGASWYVSSIQRQYECWRITCRQEMNGTHSPSCDLSFLDCASLDEPERQAWFSRTRVLTDCDALNDQSFQFGMFADAFLDQVSSARFIQKYFYCLWWGLKSLSCYGQNIKTSTYVGETLFSIFICIAGKESIYYTIMDPDDDYEEAGLGESSMGDNGGHGLNLGVTVLASKFAANTRKGAVKKVTIPDSDSLKMPKMFKPTEPDFSTFPED* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0303 432 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 9 349 - -
Dod09g0303 432 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 363 429 - -
Dod09g0303 432 Gene3D - 48 357 - -
Dod09g0303 432 Pfam Ion transport protein 45 349 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod09g0303 432 MobiDBLite consensus disorder prediction 411 432 - -
Dod09g0303 432 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 363 429 - -
Dod09g0303 432 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 349 - -
Dod09g0303 432 SUPERFAMILY Voltage-gated potassium channels 36 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0303 Dod-Chr9 4637471 4644566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0303 365 426 Ion Channels AT3G48010 44.118 4.81e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0303 K05391 - gmx:100783672 610.142