Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod09g0297 | ATGAAGAAAGGAAGCACAAGCAGCGAGTCTCCTAAACCTGACCGCAAAACCATTGAAAGGAACCGCAGAATTCACATGAAAACTCTTTGCTTCAAGCTTGCTTCTCTTATTCCTTCCAATCATAAATATTTCAAACAATATTCCAAATCCAAGGACATGCTGGCACAACAAGACCAGCTGGATCTGGCGGCAAGGTACATCAAGCATATGACAGAAAGAATAGAGAAATTGAAGAAGCAGAAGGAGCAAGCCATGATGGGGTCAAACCAAAGCCATAACAACAACAGCAATAAAATGATAAATTTCGACACCAAATTGCCACTGCTTGAGCTAAGAGACCTTGGTTCAGGCATAGAAGTGGTGTTGGTGAGTGGATTGAACAACAAGACCTTCATGTTGCACGAAGTGATTAGTGTCCTCGAGGAAGAAGGCGCTGAAGTTGTCACCGCAAGCTTCTCAACCGTGGGGGATAAGATTTTTTACGTTGTTCATGCTCAGGTTAAAATATCAAGAGTGGGTGTTGAGACCACAAGGGTACATCAGAGGCTCCAGGACTTGATTGCCCCTCTTGAAATCTGGGAGTACACATGA | 591 | 0.4365 | MKKGSTSSESPKPDRKTIERNRRIHMKTLCFKLASLIPSNHKYFKQYSKSKDMLAQQDQLDLAARYIKHMTERIEKLKKQKEQAMMGSNQSHNNNSNKMINFDTKLPLLELRDLGSGIEVVLVSGLNNKTFMLHEVISVLEEEGAEVVTASFSTVGDKIFYVVHAQVKISRVGVETTRVHQRLQDLIAPLEIWEYT* | 197 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod09g0297 | 196 | Coils | Coil | 60 | 87 | - | - | |
Dod09g0297 | 196 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 10 | 70 | IPR011598 | GO:0046983 | |
Dod09g0297 | 196 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 16 | 88 | IPR036638 | GO:0046983 | |
Dod09g0297 | 196 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Dod09g0297 | 196 | PANTHER | ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED | 7 | 187 | IPR015660 | GO:0003700|GO:0006357 | |
Dod09g0297 | 196 | Gene3D | - | 11 | 100 | IPR036638 | GO:0046983 | |
Dod09g0297 | 196 | SMART | finulus | 16 | 76 | IPR011598 | GO:0046983 | |
Dod09g0297 | 196 | PANTHER | TRANSCRIPTION FACTOR BHLH162 | 7 | 187 | - | - | |
Dod09g0297 | 196 | Pfam | Helix-loop-helix DNA-binding domain | 16 | 70 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod09g0297 | Dod-Chr9 | 4552021 | 4553816 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod09g0297 | 5 | 187 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT4G20970 | 33.333 | 8.50e-24 | 91.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Dod09g0297 | HLH | 5.5e-06 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod09g0297 | - | - | gmx:100811485 | 256.529 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod05g1630 | 05 | 41436358 | 41438009 | Dod09g0297 | 09 | 4552021 | 4553816 | PCT |