Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0295 ATGGCCGTTAGGGGCGTCAATTTCAAGTGGTACGACGGGTTCTTCCTCTCCATGCTCGCCACCAGCGTAGTTGTTGTGGCAATCAATTGGAAGCGGTACCATTCTTGTGCATACCCCTTGCACATATGGATTGTGGTTGACTACACTGCTGTGTTTACTTTCCGGCTATTGATGTTTGTTGACAATGGGCTTGCTTCCGGAATGGGTTTAGATTTTGGGAGGCAGCAAAGGACATGCTCGTTTCTGTGGAAGAGTAGTTGTTCTTTCAATCCTTGCATTTCTTCTGTATCCATTTCTTTGGGTTTGGACTATAATTGGTTCACTGTGGTTCATCGGCGCCAAGACTTGTGTATGTTTTACTTTCATTTAATCCTCAGTGGTGCTTTATAA 390 0.4462 MAVRGVNFKWYDGFFLSMLATSVVVVAINWKRYHSCAYPLHIWIVVDYTAVFTFRLLMFVDNGLASGMGLDFGRQQRTCSFLWKSSCSFNPCISSVSISLGLDYNWFTVVHRRQDLCMFYFHLILSGAL* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0295 129 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SIS3 1 82 IPR044793 GO:0004842|GO:0010182
Dod09g0295 129 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SIS3 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0295 Dod-Chr9 4515177 4516835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0295 58 81 C3H Transcription Factor Family AT3G47990 79.167 2.52e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0295 K16284 - zju:107407761 155.992