Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0291 ATGAAGAATTTGCAGTGGTTCAAGCAATTTCCCAACAACAGCAATGGCAAGTCAGGGAGGAGGCTCTCCCTTGGGGAGTACAAGAGAGCAATGTCATGGTCCAAGTATCTTGTGTCACCAGGTGCTGCCATCAAGGGAGGAGGTGAAGAGGAATGGAGTGCTGACATGTCTCAGTTGTTCATTGGTTCCAAATTTGCTTCTGGGAGGCACAGCAGGATCTACAGAGGTGTCTACAAGCAAAGGGATGTGGCAATCAAGCTTGTGAGCCAGCCTGAGGAGGATGAGGACTTGGCTGCTTTTCTTGAGAAGCAGTTCACCTCTGAGGTTAACTTGCTTTTCCGCTTGCGCCATCCAAATATCATTACTTTTATTGCTGCTTGCAAGAAACCCCCTGTCTTTTGTATAATTACTGAATATTTAGCTGGGGGCTCATTGAGAAAATACCTGCATCATCAAGAACCACATTCGCTTCCACTCGAACTTGTTCTGAAACTAGCCCTTGACATTGCAAGGGGAATGCAATATCTTCATTCTCAGGGGATACTTCATAGGGATCTCAAATCAGAAAACTTGCTATTGGGGGAAGATATGTGTGTAAAAGTAGCAGATTTCGGCATCTCATGCTTAGAATCTCAGTGTGGCAGTGCCAAAGGATTCACCGGAACTTATCGGTGGATGGCGCCAGAAATGATCAAAGAGAAGCATCATACTAAGAAATTAGATGTCTATAGTTTCGGCATAGTTCTCTGGGAGCTTTTAACTGGACAGACACCATTTAACAATATGACTCCAGAGCAAGCAGCATTTGCAGTTTCCCACAAGAATGCAAGGCCACCAATGCCACCGGAATGTCCATGGGCGTTAAGTAATCTCATCAACAGATGCTGGTCAAGCAATCCAGATAAAAGGCCACATTTTGATGAGATAGTCTCCATTTTGGAGAACTACACAGAATCACTGGAGCAGGATCCTGGCTTTTTCACAACTTGCAAACCGCGTCCTACTAATAACACAATTCTGGGATGCTTTCCTAAATGCAATGCTCGCCATAAATCTGCTGCCTGCAAAGCTTAA 1074 0.4479 MKNLQWFKQFPNNSNGKSGRRLSLGEYKRAMSWSKYLVSPGAAIKGGGEEEWSADMSQLFIGSKFASGRHSRIYRGVYKQRDVAIKLVSQPEEDEDLAAFLEKQFTSEVNLLFRLRHPNIITFIAACKKPPVFCIITEYLAGGSLRKYLHHQEPHSLPLELVLKLALDIARGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKLDVYSFGIVLWELLTGQTPFNNMTPEQAAFAVSHKNARPPMPPECPWALSNLINRCWSSNPDKRPHFDEIVSILENYTESLEQDPGFFTTCKPRPTNNTILGCFPKCNARHKSAACKA* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0291 357 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 335 - -
Dod09g0291 357 PANTHER SERINE-THREONINE PROTEIN KINASE 1 335 - -
Dod09g0291 357 Gene3D Phosphorylase Kinase; domain 1 49 140 - -
Dod09g0291 357 SMART serkin_6 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0291 357 Gene3D Transferase(Phosphotransferase) domain 1 142 331 - -
Dod09g0291 357 SUPERFAMILY Protein kinase-like (PK-like) 50 313 IPR011009 -
Dod09g0291 357 Pfam Protein tyrosine and serine/threonine kinase 62 313 IPR001245 GO:0004672|GO:0006468
Dod09g0291 357 CDD STKc_MAP3K-like 66 313 - -
Dod09g0291 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Dod09g0291 357 PRINTS Tyrosine kinase catalytic domain signature 240 262 IPR001245 GO:0004672|GO:0006468
Dod09g0291 357 PRINTS Tyrosine kinase catalytic domain signature 284 306 IPR001245 GO:0004672|GO:0006468
Dod09g0291 357 PRINTS Tyrosine kinase catalytic domain signature 175 193 IPR001245 GO:0004672|GO:0006468
Dod09g0291 357 PRINTS Tyrosine kinase catalytic domain signature 221 231 IPR001245 GO:0004672|GO:0006468
Dod09g0291 357 PRINTS Tyrosine kinase catalytic domain signature 137 150 IPR001245 GO:0004672|GO:0006468
Dod09g0291 357 ProSiteProfiles Protein kinase domain profile. 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0291 Dod-Chr9 4461287 4466400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0291 32 346 MAP Kinase Kinase Kinase AT1G62400 61.321 1.17e-139 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dod09g0291 PK_Tyr_Ser-Thr 1.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0291 - - gmx:100807757 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1624 05 41344914 41349590 Dod09g0291 09 4461287 4466400 PCT