Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0279 ATGTGCCCACTCAGAAGGCAGCTCCTTCCACCAACGTATCAGCAAAGGACTATTGTTCTAGGTGTCAGCAGGGTTTCTTTTACTCAGATCATGGTAGACCAAAATGTACACTTGAGGATTCAGAAGGAACACAAATTCTACCTCCTTGGTAAATTATCATCTGAGGTTGGATGGAACTATTATGATACCATCAGGGAACTTGAAAAGAAGACAAAGGAAAAAGCACATTTGGCTTATGAGAGAAAGAAAGAGCTCGCCAAATTAGGGGTGAAAGCTGAGAAGGTTGCCAATGATAAGCTTAGTCCCCAACTTGATATTTTGCTCCTATTAAGCACTGAGTAG 342 0.4152 MCPLRRQLLPPTYQQRTIVLGVSRVSFTQIMVDQNVHLRIQKEHKFYLLGKLSSEVGWNYYDTIRELEKKTKEKAHLAYERKKELAKLGVKAEKVANDKLSPQLDILLLLSTE* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0279 113 Gene3D - 62 110 - -
Dod09g0279 113 PANTHER 60S RIBOSOMAL PROTEIN L13A-4 32 107 - -
Dod09g0279 113 PANTHER RIBOSOMAL PROTEIN L13 32 107 IPR005822 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0279 Dod-Chr9 4212479 4213656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0279 38 107 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 71.429 3.76e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0279 K02872 - cit:102617059 103.219