Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0254 ATGGGTATCAAGATAAAGGGTCAAATTGAAAAGGTGAATGGGAAGGAATTGGGTTACGGTGAATTCGTGCAGAGGTACATGGAGAAGAACCATCCTGTGGTCCTCACTGGACTCATGGACCATCATAACTGGAGGGCTTCCTCTGATTGGGTCACCCCAGAAGGACATCCTAACTTTCAATTTTTCTCCACTCATTTTGGGGCTTCTAAAGTTCAGGTTGCAGATTGTGACACCAGAGAGTTCACTGATCAGAAGAGAGAGGAGATGCTGGTCTCAGATTTTATAGGACGTTGCCTCGAAGTTGGCGGTTCTGCAGTTCAGTGTAGTGTTGAGAATCATGGAAGTAGTGGTCATTCTGTACCGTATTTGAAAGATTGGCATTTTGTTAAGGAGTATCCAGAATATGTACCTTATATCACTCCAATGTTCTTTTGTGATGATTGGCTTAACCTGTATCTTGACAATTTCAGAATGCATACTGATTCTGACACATACCAACAAAATGAGGAAATATGTTGCTCTGACTATCGTTTCGTTTACGTGGGGGTTAAAGGGTCTTGGACTCCTCTTCATGCTGATGTTTTCAGGTCATATAGCTGGTCGGCAAATGTCTGTGGAAAAAAGAGATGGCTTTTTCTAGATCCTTCCCAGTATCATCTTGTATTTGACAGGAATTTGAAAAGCTCTGTTTATAATATCTTTGATGAAGTATCTGACTCAAAATTTCCTGGTTTTAGAAAGGCTATGTGGTTAGAATGCACACAAGAAGCAGGTGAAATTATATTTGTTCCCAGCGGATGGTATCATCAAGTTTATAATTTGGAGGATACAATATCCATAAACCACAACTGGTTCAATGCCTATAACCTTTCTTGGGTGTGGAATTTACTTTTAAGGGACTACAATGAGGCCAAGGAATACATAGAAGACATCAAGGATATATGTGACGATTTTGAAGGCCTCTGCCAGCGCAATCTTGCTGCTAACACAGGAATGAATTTTCATGACTTCTTTACTTTCATATCGTGCTTCACCTTGGCCAACTTTGTCCTCCTTTGCTACTTCAATGGAAAATATGGAAGTCAAATTGGAAGTTCATCAACGATAGCTCAGCATTTATCAATGAATCTTGGATCTATAAGGAAGATCGCATCAGAGATGAAACACATTCATGCTCTGGAAGGAAATTATGATTGCGTTGTGGATATGATCAAAACATTTGAAGATCCTAGGTTTTCCAAATTGTGCATGGATGTAGGAAGAACATGTCTAATGATACATGACCAATCTTATTTGTACTCTGATTTTGAGAGATCTTCGATGGGTGACTTAGTGGACCTTAATGTTTTGAAAGCACACAATTCTTATCAGGTCTACACACCTGAAGATCTCATTAAATTTATAGACAATGCTGTTGCAGAACTTAGTGACTGTTACATTAAGTCATCTGTGCTACATGTTTCTTGA 1467 0.3926 MGIKIKGQIEKVNGKELGYGEFVQRYMEKNHPVVLTGLMDHHNWRASSDWVTPEGHPNFQFFSTHFGASKVQVADCDTREFTDQKREEMLVSDFIGRCLEVGGSAVQCSVENHGSSGHSVPYLKDWHFVKEYPEYVPYITPMFFCDDWLNLYLDNFRMHTDSDTYQQNEEICCSDYRFVYVGVKGSWTPLHADVFRSYSWSANVCGKKRWLFLDPSQYHLVFDRNLKSSVYNIFDEVSDSKFPGFRKAMWLECTQEAGEIIFVPSGWYHQVYNLEDTISINHNWFNAYNLSWVWNLLLRDYNEAKEYIEDIKDICDDFEGLCQRNLAANTGMNFHDFFTFISCFTLANFVLLCYFNGKYGSQIGSSSTIAQHLSMNLGSIRKIASEMKHIHALEGNYDCVVDMIKTFEDPRFSKLCMDVGRTCLMIHDQSYLYSDFERSSMGDLVDLNVLKAHNSYQVYTPEDLIKFIDNAVAELSDCYIKSSVLHVS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0254 488 Gene3D Cupin 2 286 - -
Dod09g0254 488 ProSiteProfiles JmjC domain profile. 121 301 IPR003347 -
Dod09g0254 488 Pfam Cupin-like domain 21 284 IPR041667 -
Dod09g0254 488 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE JMJD4 6 475 - -
Dod09g0254 488 SMART cupin_9 143 301 IPR003347 -
Dod09g0254 488 SUPERFAMILY Clavaminate synthase-like 8 313 - -
Dod09g0254 488 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 6 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0254 Dod-Chr9 3773272 3777697 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0254 7 293 Glycosyltransferase AT1G78280 23.490 4.70e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Dod09g0254 Cupin_8 1e-22 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0254 - - gsj:114409851 825.469