Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0246 ATGGCATCATCAAGCTCGTACAATTCTCCATGTGCCGCCTGCAAATTCTTGAGGAGAAAATGCATGCCAGGATGCATCTTTGCACCTTACTTCCCACCCGAGGAGCCCCAGAAATTCGCCAACGTGCACAAGATCTTCGGTGCCAGCAATGTCACCAAACTCCTCAACGAGCTTCTGCCCCAGCAGAGGGAGGATGCAGTAAACTCCCTCGCCTATGAGGCAGAAGCTCGTGTGAGAGACCCGGTCTATGGCTGCGTTGGTGCCATCTCTTTCCTTCAAAGACAAGTCCAGAGGCTCCAAAAGGAGCTTGACGCCACCAATGCCGAGCTTCTCCGCTATGCCTGCAATGAAATCCCCCCTCATCATCAGCATCAATCTCTGCCACCTATGCCACCATCCATCGCTTCAATTCAACCAATTCCCCAAAGGCATCACTATGGTAGTGCTGCTGCAAGAATTGGTAATGATGTTGGAAGTGGGTTTTATAGGCAATCTCCTACCACCACCACCACCACTTATCCTTTCCCTTATGCTCTTCCTTGGACTGATCCTTCTCCTGATGATATCAATGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGTAATTTGTGA 615 0.5089 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPQQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDATNAELLRYACNEIPPHHQHQSLPPMPPSIASIQPIPQRHHYGSAAARIGNDVGSGFYRQSPTTTTTTYPFPYALPWTDPSPDDINGGGGGGGGEGGGNL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0246 204 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Dod09g0246 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 196 - -
Dod09g0246 204 Coils Coil 89 116 - -
Dod09g0246 204 MobiDBLite consensus disorder prediction 182 204 - -
Dod09g0246 204 PANTHER ELONGATED PETIOLULE 1 1 196 - -
Dod09g0246 204 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0246 Dod-Chr9 3669044 3671774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0246 1 113 AS2 family AT5G63090 92.105 4.16e-72 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod09g0246 LOB 4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0246 - - gmx:100799774 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1580 05 40836373 40836942 Dod09g0246 09 3669044 3671774 PCT