Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0237 ATGGAATCCAGACCCGGTCACACCATCAAGCTCCTCTGTAGCTACGGCGGCAAGATCCTCCCACGCGCCACCGACGGCGAGCTCCGTTACGTCGGCGGCCACACCAGAGTCCTCACCGTCGATCGTTCTATTTCTTTCTCAGAATTAATGGTGAAGCTTGGGGAATTGTGCGGTTCCTCCGTGACCTTGCGGTGTCAGTTGCCGAACGGTGACTTGGAAACCTTGATCTCCGTCAAAGGCGACGAAGATCTGGCGAACATAATCGAAGAATACGATCGCGCTTCGTCGAAATTGGCTCATCCGTTGAAGATCAGAGCAGTTCTGTATTCCGCCGAAATCGCTCAAGAAGGTGTCTCCGGCGGCGTCTTCGTCGTCGTCTGCTTCGTCCAGCGCCAGTCACTCTCCGGCCAGATCTCCTTACGCCTCCGCGGATTCGCTGCCGCACGCGGCGGCGTACCGCGTCGTCCGCCATAG 474 0.5781 MESRPGHTIKLLCSYGGKILPRATDGELRYVGGHTRVLTVDRSISFSELMVKLGELCGSSVTLRCQLPNGDLETLISVKGDEDLANIIEEYDRASSKLAHPLKIRAVLYSAEIAQEGVSGGVFVVVCFVQRQSLSGQISLRLRGFAAARGGVPRRPP* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0237 157 CDD PB1_UP2 12 108 - -
Dod09g0237 157 SMART PB1_new 23 111 IPR000270 GO:0005515
Dod09g0237 157 SUPERFAMILY CAD & PB1 domains 25 109 - -
Dod09g0237 157 Gene3D - 29 108 - -
Dod09g0237 157 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Dod09g0237 157 PANTHER OS05G0427100 PROTEIN-RELATED 6 110 - -
Dod09g0237 157 PANTHER PB1 DOMAIN PROTEIN 6 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0237 Dod-Chr9 3493158 3496520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0237 7 96 MAP Kinase Kinase Kinase AT5G57610 50.000 4.01e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0237 - - gmx:100797123 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1568 05 40653280 40654912 Dod09g0237 09 3493158 3496520 PCT