Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0218 ATGGAGATGGAGCGCGTCGTTGAATTCCCACATACCTACATGGATCGCCCCCCGAGAAAGAGGGCAAGATTGGGCTGGGATGTACCCGAGGTCCCAAAGGCTCAGGTAGGATTGTTTTGTGGACAAGAGATTGAGAATATTACAAGCTATGATACTTCAGAGCATACCACTAGTTCTCTGTTTAAGGGAGTTGCTCGAAATGGTTCTCCCCCATGGCGTGATGATGACAAAGATGGCCATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATCCATAGCAAAATGGGTGAAGGAACATTTGGACAAGTCTTGGAGTGCTGGGACAGAGAAAGAAAGGAAATGGTTGCTATAAAAATTGTCCGTGGGATAAAGAAATATCGAGAGGCAGCCATGATAGAAATTGACGTGCTGCAACAGCTTGGTAAACATGATAAAGGTGGCAATCGTTGTGTACAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGTTCATTTCCCATTGATCTTGTCCGCGACATTGGCAGACAACTGTTGGAATGTGTAGCATTCATGCATGACTTACACATGATCCATACTGACCTGAAGCCGGAGAACATTCTTCTAGTTTCACCGGAATATGTTAAAATCCCTGACTACAAGAGCTCATCCAGGTCACCGAATTCCTTTTTCAAGAGAGTGCCCAAGTCAAGTGCTATAAAGGTTATTGATTTTGGCAGCACTACTTACGAACGTGAGGATCAGAGCTACATTGTCTCAACTCGTCATTATAGGGCACCTGAAGTTATTCTTGGACTTGGGTGGAGTTATCCTTGTGATGTATGGAGCGTTGGCTGTATATTGGTTGAATTATGCACCGGTGAAGCTTTGTTTCAGACTCATGAAAATTTGGAGCACCTTGCCATGATGGAGAGGGTGCTTGGACCATTACCACAGATGATGTTGAAGAGAGTTGATCGACATGCTGAGAAGTATGTCCGAAGGGGTAGATTGGATTGGCCAGAGGGTGCGGCCTCAAGGGAGAGTATTAAGGCTGTAACGAAGCTTCCTCGGTTACAGAACCTTATAATGCAGCATGTGGATCATTCAGCTGGAGATTTAATACATCTTTTGCAGGGGCTACTTAGATATGACCCCTTTGAAAGACTTACAGCGAGGGATGCTCTGAGGCATTCCTTCTTTAGAGATCACCTTAGGAGATGA 1275 0.4384 MEMERVVEFPHTYMDRPPRKRARLGWDVPEVPKAQVGLFCGQEIENITSYDTSEHTTSSLFKGVARNGSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIDVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVRDIGRQLLECVAFMHDLHMIHTDLKPENILLVSPEYVKIPDYKSSSRSPNSFFKRVPKSSAIKVIDFGSTTYEREDQSYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQMMLKRVDRHAEKYVRRGRLDWPEGAASRESIKAVTKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPFERLTARDALRHSFFRDHLRR* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0218 424 ProSiteProfiles Protein kinase domain profile. 93 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0218 424 CDD PKc_CLK 80 418 - -
Dod09g0218 424 Gene3D Phosphorylase Kinase; domain 1 80 173 - -
Dod09g0218 424 PANTHER KINASE AFC1 1 424 - -
Dod09g0218 424 SUPERFAMILY Protein kinase-like (PK-like) 80 421 IPR011009 -
Dod09g0218 424 Pfam Protein kinase domain 93 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0218 424 Gene3D Transferase(Phosphotransferase) domain 1 147 418 - -
Dod09g0218 424 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 424 - -
Dod09g0218 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Dod09g0218 424 SMART serkin_6 93 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0218 Dod-Chr9 2952836 2956174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0218 98 420 Core Cell Cycle Gene Families AT1G76540 25.223 1.60e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Dod09g0218 Pkinase 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0218 K08287 - gmx:100808961 825.469