Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0205 ATGTCTGTGCAGCATAGCCTGGCAATCTATAGCCCATTGATTATAAGAGCTGAGGACTTGGCTTTCTTGGAGAAAGATGATCGGCTGGCTAATTTGGAGATGGTTGGGAGAGGTGGGTGTGGAGAGGTTTACAAGGCTGAGTTGCCTGGTAGCAAAGTCAAGATGATTGCCATAAAGAAGATCCTTCAGCATTTCAAGGATGCTTCTGAGTTGGCCCAAGAAGACAGCGAGGTCTTGCACAAAAAGATGAGGCATATTCGGTCGGAGATCAACACCGTTGGTAAAATCAGGCACAGGAACTTGGTGCCCCTGCTTGCTCATGTGCCTAGACTAGAGTGCCACTACCTTGTGTACGAGTACATGAAGAATGGGAGCTTGCAGAATTTGCTGGACGAGGTCGAGGCGGGTGAGAGGGAGTTGGATTGGTTGACAAGGCACAAGATTGCACTTGGTGTGGCTTTTGGGCTTGAGTACCTTCACATGAATCACAGCCCAAGGATCATCCATAGGGATCTGAAACCTGCAAACATTCTACTTGATGATGATATGGAAGCCCGGATTACGGATTTTGGGCTTGCAAAGGCAATGTCAGATGCTCAGACACACATCTCGACTTCTAAAGTGTCTGGCACTGCTGGGTACATAGCACCTGAGTATCATCAGACACTCAAGTTCTCTGAAAAGAGTGACATTTACAGCTTTGGTGTGGTGCTTGGCGTGTTGGTGATGGGGAAATTTCCATATGATGAGTTCTTCCAGCACACGTTCGAGATGACCTTGGTGAAGTGGATGAGGAAGGTGATGACTTCAGAGAATCCTAAGAAAGCAATTGATGCAAGGCTCCTAGGCAATGGGTACGAGGAGCAAATGCTTCTGGTTTTGAGGATCGCTTGCTTCTGCACCATGGATGATCCAAAGAATAGGCCTAACAGCAAGGATATTAGGTGTGTATTGTCCATGATCAAGCACTAA 972 0.4712 MSVQHSLAIYSPLIIRAEDLAFLEKDDRLANLEMVGRGGCGEVYKAELPGSKVKMIAIKKILQHFKDASELAQEDSEVLHKKMRHIRSEINTVGKIRHRNLVPLLAHVPRLECHYLVYEYMKNGSLQNLLDEVEAGERELDWLTRHKIALGVAFGLEYLHMNHSPRIIHRDLKPANILLDDDMEARITDFGLAKAMSDAQTHISTSKVSGTAGYIAPEYHQTLKFSEKSDIYSFGVVLGVLVMGKFPYDEFFQHTFEMTLVKWMRKVMTSENPKKAIDARLLGNGYEEQMLLVLRIACFCTMDDPKNRPNSKDIRCVLSMIKH* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0205 323 Gene3D Transferase(Phosphotransferase) domain 1 125 323 - -
Dod09g0205 323 SMART serkin_6 29 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0205 323 SUPERFAMILY Protein kinase-like (PK-like) 25 319 IPR011009 -
Dod09g0205 323 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE/TYROSINE-PROTEIN KINASE SOBIR1 6 319 - -
Dod09g0205 323 Gene3D Phosphorylase Kinase; domain 1 29 124 - -
Dod09g0205 323 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 319 - -
Dod09g0205 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Dod09g0205 323 Pfam Protein kinase domain 31 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0205 323 Coils Coil 126 146 - -
Dod09g0205 323 ProSiteProfiles Protein kinase domain profile. 29 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0205 Dod-Chr9 2790312 2791283 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0205 8 323 Receptor kinase-like Gene Family AT2G31880 71.835 4.30e-175 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Dod09g0205 Pkinase 8.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0205 - - gmx:100811980 515.768