Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0194 ATGGAGCGTGATGGTTCTTCCTCTCACTATGGCCAGCCTGATAACTCAAGCTTTAGCTCAAATAGGGGGAATCCTACATCTGGAGAACATGATAAAGGCCAAACCTTTTCTGTTTCAAGTGTCTTAAGGATCATGAGACAAGCCCTCCCCAAGGATGCAAAGACGTGTGATGAGGCGAAAGAAGCCACCCGAAGCTGCGTGGTGGAGTTCATCGGACTCATAACCGACGAGGCCAACGAGCATTGCAAGAGAGAACAACGAAGGACTATCAGTTCTGAGGACCTCATATGGGCCATGTCGAGCCTTGGCTTCGACACCTATATATGCTAA 330 0.4879 MERDGSSSHYGQPDNSSFSSNRGNPTSGEHDKGQTFSVSSVLRIMRQALPKDAKTCDEAKEATRSCVVEFIGLITDEANEHCKREQRRTISSEDLIWAMSSLGFDTYIC* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0194 109 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 21 108 - -
Dod09g0194 109 SUPERFAMILY Histone-fold 35 108 IPR009072 GO:0046982
Dod09g0194 109 MobiDBLite consensus disorder prediction 1 36 - -
Dod09g0194 109 Gene3D Histone, subunit A 24 109 IPR009072 GO:0046982
Dod09g0194 109 MobiDBLite consensus disorder prediction 8 36 - -
Dod09g0194 109 PRINTS CCAAT-binding transcription factor subunit A signature 101 109 - -
Dod09g0194 109 PRINTS CCAAT-binding transcription factor subunit A signature 63 81 - -
Dod09g0194 109 PRINTS CCAAT-binding transcription factor subunit A signature 82 100 - -
Dod09g0194 109 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 39 99 IPR003958 -
Dod09g0194 109 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 21 108 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0194 Dod-Chr9 2699830 2701543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0194 1 108 CCAAT-HAP3 Transcription Factor Family AT1G21970 39.706 8.92e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Dod09g0194 CBFD_NFYB_HMF 5.4e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0194 K08065 - bvg:104900859 98.9821