Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0163 ATGGCCACCAACCAAACACGCCGTAACTCCACCATCGACCCAAACAGCGGATTCTCCCCACATTCCAGAACCTTCCACAGCCTTCGCCCAAACGTCCCCCTCCCTCCGCCCTCCCTCCCTTTCTCAATCACCGACTACGCACTCTCCCTCCTCCCCGACGCCGCCGTCACCTCCGCCACCACAGCCCTCATCGACGCCGCCACCGACCACCGCCTCCCCTACCTACTTCTCCTCCGCCAAATAAAATCCCTCGCCTCCTCCCTCCAATCCCTCACCCCACTCAAAAAAGGCCACGTGGCACTCATCCTCATCCCTCCCTCCCTACACGTTCCTGCACTCTATCTCTCCCTCTTATCCCTCGGAATCGTCATCTCCCCCGCCAACCCGCTCAGCTCCCCTGCCGAGTTGACTCACCTGGTCCGACTCGTCAAGCCTCAAATCGCCTTCGCCACGTCAAAAACCGCCGATAAAATCCCCAAACTACCCTTCGGCACCGTCCTCCTCGACTCGCCCCAGTTCCTCTTCATGCTCGAGAACGCCAACTCGGAACCCGGCCGAGTCGAGGTGAGTCAGTCCGAGTCAGCGGCGATTCTCTTCTCCTCCGGCACCACTGGCCGAGTCAAGGGCGTGGTGCTCACTCACGGAAACCTCATCGCACTGATCGGAGGGTTCTGCTACCTGAAGCACGTGACGCAACAGGAGGAACTAGAAACACAAGAGGTGGCGCTGCTGACGATACCGCTGTTCCACGTGTTTGGGTTCTTCATGCTGATAAGGGGACTGGCGGCGGGGGACACGATGGTGCTGATGGAGAGGTTCGATTTCGAGGGGATGCTGAGGGCGGTGGAGAGGTATGGGGTGAGGTACATGCCGGTATCGCCACCGCTGGTGGTGGCGCTGACGAAGTCGGAGCTGGCGAGGAAGTACGACCTGAGCTCGCTGAGGGTGTTGGGGTCCGGTGGGGCGCCGCTCGGGAAGGAGGTGGCGGAGAGCTTCAGTGCCAAGTTCCCTGGCGTGGACATTGTGCAGGGCTATGGTCTTACTGAAAGTGCAGGAGGGGCAGCAAGAATGATAGGGCAAGATGAGGCTAAGCGCCATGGCTCTGTGGGTCGACTAGCTGAAAATACGGAGGCCAAGATAGTGGACCCTGTAACTGGAGAGTCATTGCCTCCTGGTCAGCAAGGGGAGCTGTGGTTGCGAGGACCAACAATCATGAAAGGTTACGTAGGAGATGATGAGGCGACTGCTCAAACATTGGATTCAGAGGGATGGTTGAAGACTGGTGATCTTTGTTATTTTGACTCTGATGGTTTCCTCTACATTGTAGATAGGCTGAAGGAATTGATCAAGTACAAAGCTTATCAGGTTCCGCCAGCTGAATTGGAGCATATCCTTCACTCCAATTCTGAAATTGCTGATGCTGCAGTAGTTCCATATCCTGATGAAGATGCAGGGCAAATTCCAATGGCATTTGTGGTAAGGAAGCCTGGAAGCAACATCACTGCAGCTCAGGTCATGGAGTTTGTGGCAAAGCAGGTTGCTCCATACAAGAAGATACGGCGTGTTTCTTTTATTAACTCTATACCAAAATCTCCCGCTGGCAAAATTTTGAGAAGAGAATTAGGTGATATTGCTCTAACTAGCGGCTCATCCAAGTTGTAA 1662 0.5529 MATNQTRRNSTIDPNSGFSPHSRTFHSLRPNVPLPPPSLPFSITDYALSLLPDAAVTSATTALIDAATDHRLPYLLLLRQIKSLASSLQSLTPLKKGHVALILIPPSLHVPALYLSLLSLGIVISPANPLSSPAELTHLVRLVKPQIAFATSKTADKIPKLPFGTVLLDSPQFLFMLENANSEPGRVEVSQSESAAILFSSGTTGRVKGVVLTHGNLIALIGGFCYLKHVTQQEELETQEVALLTIPLFHVFGFFMLIRGLAAGDTMVLMERFDFEGMLRAVERYGVRYMPVSPPLVVALTKSELARKYDLSSLRVLGSGGAPLGKEVAESFSAKFPGVDIVQGYGLTESAGGAARMIGQDEAKRHGSVGRLAENTEAKIVDPVTGESLPPGQQGELWLRGPTIMKGYVGDDEATAQTLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHSNSEIADAAVVPYPDEDAGQIPMAFVVRKPGSNITAAQVMEFVAKQVAPYKKIRRVSFINSIPKSPAGKILRRELGDIALTSGSSKL* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0163 553 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 25 541 - -
Dod09g0163 553 MobiDBLite consensus disorder prediction 1 30 - -
Dod09g0163 553 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Dod09g0163 553 Gene3D - 38 446 IPR042099 -
Dod09g0163 553 MobiDBLite consensus disorder prediction 1 26 - -
Dod09g0163 553 Pfam AMP-binding enzyme 54 451 IPR000873 -
Dod09g0163 553 SUPERFAMILY Acetyl-CoA synthetase-like 54 546 - -
Dod09g0163 553 Gene3D - 447 547 IPR045851 -
Dod09g0163 553 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 25 541 - -
Dod09g0163 553 Pfam AMP-binding enzyme C-terminal domain 460 535 IPR025110 -
Dod09g0163 553 CDD 4CL 58 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0163 Dod-Chr9 2260584 2270187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0163 3 553 Monolignol Biosynthesis Gene Families AT5G63380 59.929 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0163 K01904 - gmx:100777435 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0163 09 2260584 2270187 Dod09g0163 09 2260584 2270187 ECH