Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0158 ATGGAAGACTCCGTTCAGCGCAAGATGGAGCAATTTTATGAAGGATCTGATGGGCCGCCCCTCCGCGTTCTTCCCATCGGTGGGCTGGGTGAAATTGGGATGAATTGCATGCTTGTTGGGAACCATGATCGCTATATCCTCATTGATGCTGGAGTCATGTTTCCAGACTACGATGAACTTGGAGTCCAAAAGATCATACCAGATACAACATTTATAAAAAAATGGAGCCACAAAATTGAAGCACTTGTTATAACACATGGTCATGAAGATCATATTGGCGCGTTGCCTTGGGTCATCCCAGCATTGGATTCCACCACACCAATTTTTGCATCTTCCTTTACGATGGAGCTTATTAAAAAACGTTTGAAGGAGCATGGTATTTTTATTCCATCTAGACTCAAGATATTTAGAACGAAGAAGAAGTTTGTGGCTGGGCCATTTGAGGTAGAACCTATCAGGGTGACCCATTCTATTCCTGACTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATTGATGAGACACCACTAGATGGGAAAGTTTTTGATCGTGAGGCTTTAGAGGAACTCTCCAAAGAAGGAGTGACACTGATGATGAGTGATTCAACAAACATACTCTCACCTGGAAGGACAATAAGTGAATCTGTTGTGAAAGATGCATTATTGAGGCATATTTCAGCTACTAAAGGAAGGGTTATTACAACCCAGTTTGCATCTAATCTGCATCGGCTTGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGCCGAAAGTTGGTATTTGTTGGCATGTCTTTAAGGACTTATTTAGATGCAGCATGGAAGGATGGAAAGGCTCCAATTGATCCATCCACTTTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGATCTCAAGCAGAACCACGTGCTGCCTTGAATCTTGCATCATATGGCAGTAGTCATGCTTTCAAACTAACCAAGGAAGATGTTGTTTTGTATTCAGCTAAGGTCATCCCGGGTAATGAGTCTCGTGTGATGAAAATGCTAAACCGCATATCAGAGATCGGATCAACAATAGTAATGGGAAAAAATGAAGGTCTGCACACATCTGGTCATGCATATCGAGGAGAACTGGAGGAAGTACTAAGAATAGTGAAGCCACAGCATTTTCTTCCAATACATGGAGAACTGCTGTTCCTGAAGGAGCATGAATTACTTGGAAAATCAACTGGCATTCGGCACACTGCTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCACATTTGAGAAATAGAAGAGTTCTTTCTAATGGTTTCAGTTCCCTTGGAAAAGAGAACTTACAGTTGAAGTATAGTGATGGTGACAGAGCATTTGGTACATCAAGCGAACTCTTCATTGATGAAAGATTGAAAATTGCATTAGATGGCATCATTGTGGTTAGCATGGAAGTATTTCGCCCTCAAGCAGACAGTTTGGCTGAAAACACCTTAAAAGGGAAGATAAGGATTACCACAAGATGCCTATGGCTTGACAAAGGGAAGCTATTGGATGCACTGCATAAAGCTGCTCATGCTGCTCTTTCAAGCTGCCCTGTAAATTGTCCACTCACTCACATGGAAAGAACTGTGGCTGAGGTGTTGAGGAAGATGGTGAGGAAGTACAGTGGTAAACGGCCCGAAGTTATTGCCATTGCTATAGAAAATCCTGATGCTGTTCTTGCTGATGAGATAAACACAAAGTTGTCAGGCAAATCCCATGTGAGTACTGGAATATCAACATTTAGAAAAGTAGTGGATGGACGTGGGAAGGAAAATCAGCCCACCACAATGCAAATAAGAGATGATGGCATTGATGTTGAAGGACTTCTACCTGAGGAAGACACCACCACATCAAGTGGAGCTGAGGGTGATTCATTGGAGTCAGATGATTCAGATGAATTTTGGAACCCATATATTGCATCCTCACCAGTTAAGAAGTCGATCAAAGCTAACAATGGTTATGTTTCACGAAAGGAGCATAAGTCCAGTCTTAAAAAAGATGATTCTGAAGAGCACAAGTCCTGTCTTAAGAAAGATGATTCTGAAGAGCATAAGTCCAGTCTTAAGAAAGATGATTCTGAAGACACTGGTGAAGCCAACTCTCAAAAGACGTCTAATTCTGAACCCAAGTCTTCAACAGTGAAGAGAAATAAATGGAAACCTGAAGAAGTTAAGAAGCTGATTGGCATGCGTGGGGAACTACATGATAGATTTCAAATTGTGAAGGGAAGGATGGTTCTCTGGGAAGAGATATCTCAGAATTTGTTGGCTGACGGGTTCAGCAGAAGTCCTGGACAGTGTAAATCACTTTGGGCATCTTTGGTACAGAAATATGAGGAGATCAAGAATGAGGAGGATAGCAAGAGCAGTTGGCAATATCTCGAGGACATGAAAAGGGTAATGCCTGATAGTGAAGCACTGGCAACAAAATGA 2505 0.4196 MEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWSHKIEALVITHGHEDHIGALPWVIPALDSTTPIFASSFTMELIKKRLKEHGIFIPSRLKIFRTKKKFVAGPFEVEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNILSPGRTISESVVKDALLRHISATKGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDVVLYSAKVIPGNESRVMKMLNRISEIGSTIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFSSLGKENLQLKYSDGDRAFGTSSELFIDERLKIALDGIIVVSMEVFRPQADSLAENTLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLTHMERTVAEVLRKMVRKYSGKRPEVIAIAIENPDAVLADEINTKLSGKSHVSTGISTFRKVVDGRGKENQPTTMQIRDDGIDVEGLLPEEDTTTSSGAEGDSLESDDSDEFWNPYIASSPVKKSIKANNGYVSRKEHKSSLKKDDSEEHKSCLKKDDSEEHKSSLKKDDSEDTGEANSQKTSNSEPKSSTVKRNKWKPEEVKKLIGMRGELHDRFQIVKGRMVLWEEISQNLLADGFSRSPGQCKSLWASLVQKYEEIKNEEDSKSSWQYLEDMKRVMPDSEALATK* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0158 834 MobiDBLite consensus disorder prediction 676 722 - -
Dod09g0158 834 Pfam Beta-lactamase superfamily domain 44 180 IPR001279 -
Dod09g0158 834 Gene3D - 743 804 - -
Dod09g0158 834 Gene3D - 222 372 IPR042173 -
Dod09g0158 834 MobiDBLite consensus disorder prediction 610 662 - -
Dod09g0158 834 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 706 834 - -
Dod09g0158 834 SMART Lactamase_B_5a 33 233 IPR001279 -
Dod09g0158 834 MobiDBLite consensus disorder prediction 675 742 - -
Dod09g0158 834 SUPERFAMILY Metallo-hydrolase/oxidoreductase 21 435 IPR036866 -
Dod09g0158 834 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 378 415 IPR011108 -
Dod09g0158 834 Pfam Myb/SANT-like DNA-binding domain 740 823 IPR044822 -
Dod09g0158 834 PANTHER RIBONUCLEASE J 706 834 - -
Dod09g0158 834 CDD GT1 741 806 - -
Dod09g0158 834 ProSiteProfiles Myb-like domain profile. 735 799 IPR001005 -
Dod09g0158 834 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 1 707 - -
Dod09g0158 834 CDD RNaseJ_MBL-fold 24 435 - -
Dod09g0158 834 Gene3D - 25 437 IPR036866 -
Dod09g0158 834 PANTHER RIBONUCLEASE J 1 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0158 Dod-Chr9 2210811 2218876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0158 742 825 Trihelix Transcription Factor Family AT2G38250 37.209 6.98e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod09g0158 Lactamase_B_2 2.4e-09 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0158 - - lang:109326906 1381.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1508 05 39998521 40006528 Dod09g0158 09 2210811 2218876 PCT