Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0151 ATGGTCTCGACGAGACGCAACAGTGGATCTCTCTCCGCCAACAACACCAAACGATCTTCCTCCTCAGAAGACAAACCTACTCCTTCTTCTTCTTCCCCAAAGCGACATAAGGTTGACAGTGGTGGTGGTGCGTCGGAGAAGCCCGTGCCGGCGGCGGAGAATTCGAAGGAATTGCGAGTTCCGGAGGCTGCTGCCGATCCCGGAGAATGCGTTACTGGCGACGCTCAGATCGCCGGAAATGACGGCAAGGCCGATTCCGCGCCGGCCGTGCCCGTAACGGCGCCGATCGCCGATGGTTCTTCGCCGAACTTGGTAGCTGATAAACCAAAGGGTTCGTTCTCTTCTTTGAGTATATATCAGAAACAAAATCCCAACGTTGAGGATTCAGTTCCCTGGTGCAGGCTCTTGTCCCAATTTTCACAGAATCCAAATGTTCCGATCTGCACACCAAATTTCACGATTGGTTCTAATAGGCATTCCAGCTTCCCGTTGAAGGATCAGGCGATAAGTGGAACTTTGTGCAAGATCAAGCATACCCAGCATGAGGGGAATGCTGTAGCTGTGCTAGAAAGTACGGGCAGCAAAGGATCTGTGCTAGTAAATGGGACGCTTGTCAAGAGGAATACCAGCCGTTTGCTTAACTCAGGCGATGAAGTGGTTTTTGGTGGTTTGATGGGAAATCATGCTTACATTTTTCAGCAACTAAATACTGAAGCTGCAGTTAAGGGTGCAGTTCAGAGTGGTGTTGGGAAGTTTATGCAGATTGAAAGGAGAACCGGAGACCCATCAGCCGTAGCTGGGGCTTCTATTTTGGCCTCTCTGTCTAACCTCAGACAGGATCTTACAAGATGGAAGTCTCCATCTCTATCTGCCAGTAAACCTCAACAGGGTACTGATGTTTCAAGTCCTGCTGTTCTGAATGATGGTACAGAAAATGAGCTTGATGGGCTGGAAGGCAACTCAGCTCCAAATGAAGGGACTGATAAAGCTGCTGATGTTGGAGCAAGCGAAAAGAATTCTCCTATGGATTGCGATCCAGATGATGCGGGCACAGAGGCAGGCAATGTAAAAATCTCTGGGGTGAATGATTTCCTAAGGCCTTTCTTGAGGATCCTAGCTGGATCTAGTTGTAAACTGAAATTGAGCAAAAGTATCTGTAAACAGGTGTTGGAAGAAAGAAATGGGATGAGGGATACACAAACTGCGTCATCTTCGGGTGCATCTGTGCGCTGTGCAGTTTTTAAAGAAGATGTTCATGCTGCAATACTGGATGCGAAAGATATAGAAGTGTCCTTTGACAACTTCCCATATTATTTGAGTGAGAATACAAAACACGTCCTGGTTGCAGCTTGCTTCATACACCTGAAGAATAAAGAACATGTAAAGTACACAACAGATTTTACAACCATAAACCCGCGAATTCTACTCTCAGGACCCGCAGGGTCAGAAATATATCAGGAGATGTTGGTAAAAGCACTTGCAAAATACTTCGGAGCTAAATTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCTTCCAAGGAAGCTGAGCTGCTCAAAGATGGATTTAATGCTGAGAAATCATGCAGCTGCACAAAACAAAGTCCTACAGCCACAGACGTGGCTAGGAGTATGGATCTATCAACTAGTGAAACAGATACACCTAGCTCTTCAAATGCACCTACTCCATATGGCCTTGAGTCTCAAGCTAAGTTGGAAATTGATAGTGTGCCATCTACTTCTGTGGCAGCTAAAAGTAGCACGTTTAAACTGGGTGACAGGGTAAAATATAGCTTTTCATCTTCTGGTAGCCTGTATCAGGCATCTTCTTCAAGGGGCCCGCCTAATGGAAGTCGGGGGAAGGTTGTCTTACTCTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTCGATAAGCCCATACCTGATGGAGTTGATCTTGGAGATGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGCCAGTGATCTGCGATTGGAAAACACTGGTGTTGACGAACTGGACAAATTACTTATCAATACCTTGTTTGAGGTTGTGCATAGTGAGAGCAGAAGTGCACCTTTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAATGGAGATCCATCTTCATTTAGAAGTAAGCTTGAAAAGCTTCCGGACAATGTGGTGGTAATAGGTTCGCACACCCACTCTGACAGTCGAAAAGAGAAGTCGCATCCTGGAGGTTTGCTTTTTACAAAGTTTGGCAGCAATCAGACTGCCCTTCTTGACCTGGCTTTCCCGGATAGTTTTGGAAGATTGCATGACAGAGGAAAGGAGGTCCCAAAGCCTAACAAAACTTTGACTAAGCTTTTCCCAAATAAAGTAACAATTCATATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAACAGCAACTTGATCGTGATGTCGAGACTCTCAAAATCAAAGGAAATTTGCACCATTTGCGCACAGTCTTGAGCCGCTGTGGGATGGATTGTGAAGGACTTGAGACCGTGTGCATTAAGGATCAAACACTTACAAATGAAAATGCGGAGAAGATAGTTGGTTGGGCTTTAAGTCATCACCTCATGCAGAATTCTGAAGCTGATCCCGATGCAAAGCTTGTTTTGTCTTCTGAGAGCATCCAGTATGGAATTGGGATCTTACAGGCTATCCAGAATGAGTCAAAGAGCCTGAAAAAGTCTCTTAAGGATATTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTAGCTGACGTTATTCCACCTAGTGACATTGGTGTTACTTTTGATGACATTGGAGCTCTTGAAAATGTTAAGGATACGTTGAAGGAATTGGTGATGCTTCCTTTACAAAGGCCTGAGCTTTTTTGCAAGGGACAATTAACCAAGCCTTGCAAGGGCATCTTATTATTTGGTCCTCCTGGAACAGGCAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCGGGTGCAAACTTCATTAACATTTCCATGTCAAGCATCACATCCAAGTGGTTTGGTGAGGGTGAGAAATACGTGAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCACCTAGTGTTATATTTGTTGATGAGGTTGATAGCATGTTGGGCCGGAGAGAAAATCCAGGGGAACATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCTTGCGTACAAAGGATACTGAGCGAGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATACGCAGACTGCCGCGGAGATTAATGGTAAATTTGCCAGATGCTCCAAACAGAGCAAAAATATTAAAAGTAATACTGGCAAAAGAGGACTTGTCTCCTGATGTTGATCTGGATGCAGTTGCAAGTATGACCGATGGATATTCTGGAAGTGATCTCAAGAATTTGTGTGTAGCTGCTGCACACCGTCCAATTAAAGAGATATTAGAAAAGGAAAAGAAGGAACAAACTGCCGCTCTAGCAGAAGGTAGACCTGCTCCAGCATTAAGTGGAAGTGAAGATATCCGGTCTTTGAGCATGGAAGACTTTAAGTATGCTCATCAACAGGTGTGTGCAAGTGTTTCCTCCGAATCCATAAATATGAATGAGCTTTCACAATGGAATGATCAATACGGTGAAGGTGGATCAAGAGTAAAGAAATCGCTGAGCTATTTCATGTGA 3726 0.4447 MVSTRRNSGSLSANNTKRSSSSEDKPTPSSSSPKRHKVDSGGGASEKPVPAAENSKELRVPEAAADPGECVTGDAQIAGNDGKADSAPAVPVTAPIADGSSPNLVADKPKGSFSSLSIYQKQNPNVEDSVPWCRLLSQFSQNPNVPICTPNFTIGSNRHSSFPLKDQAISGTLCKIKHTQHEGNAVAVLESTGSKGSVLVNGTLVKRNTSRLLNSGDEVVFGGLMGNHAYIFQQLNTEAAVKGAVQSGVGKFMQIERRTGDPSAVAGASILASLSNLRQDLTRWKSPSLSASKPQQGTDVSSPAVLNDGTENELDGLEGNSAPNEGTDKAADVGASEKNSPMDCDPDDAGTEAGNVKISGVNDFLRPFLRILAGSSCKLKLSKSICKQVLEERNGMRDTQTASSSGASVRCAVFKEDVHAAILDAKDIEVSFDNFPYYLSENTKHVLVAACFIHLKNKEHVKYTTDFTTINPRILLSGPAGSEIYQEMLVKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGFNAEKSCSCTKQSPTATDVARSMDLSTSETDTPSSSNAPTPYGLESQAKLEIDSVPSTSVAAKSSTFKLGDRVKYSFSSSGSLYQASSSRGPPNGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGDACEGGQGFFCNASDLRLENTGVDELDKLLINTLFEVVHSESRSAPFILFMKDAEKSIVGNGDPSSFRSKLEKLPDNVVVIGSHTHSDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKGNLHHLRTVLSRCGMDCEGLETVCIKDQTLTNENAEKIVGWALSHHLMQNSEADPDAKLVLSSESIQYGIGILQAIQNESKSLKKSLKDIVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSPDVDLDAVASMTDGYSGSDLKNLCVAAAHRPIKEILEKEKKEQTAALAEGRPAPALSGSEDIRSLSMEDFKYAHQQVCASVSSESINMNELSQWNDQYGEGGSRVKKSLSYFM* 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0151 1241 Pfam ATPase family associated with various cellular activities (AAA) 977 1106 IPR003959 GO:0005524|GO:0016887
Dod09g0151 1241 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 75 363 - -
Dod09g0151 1241 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 388 1241 - -
Dod09g0151 1241 SUPERFAMILY SMAD/FHA domain 132 224 IPR008984 GO:0005515
Dod09g0151 1241 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 388 1241 - -
Dod09g0151 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 936 1216 IPR027417 -
Dod09g0151 1241 Pfam AAA+ lid domain 1130 1165 IPR041569 -
Dod09g0151 1241 CDD FHA 152 233 IPR000253 GO:0005515
Dod09g0151 1241 Pfam FHA domain 153 222 IPR000253 GO:0005515
Dod09g0151 1241 Gene3D - 573 673 - -
Dod09g0151 1241 MobiDBLite consensus disorder prediction 285 308 - -
Dod09g0151 1241 Gene3D - 131 241 - -
Dod09g0151 1241 Gene3D - 935 1215 IPR027417 -
Dod09g0151 1241 Gene3D - 1109 1203 - -
Dod09g0151 1241 CDD AAA 975 1108 - -
Dod09g0151 1241 MobiDBLite consensus disorder prediction 1 36 - -
Dod09g0151 1241 MobiDBLite consensus disorder prediction 1 90 - -
Dod09g0151 1241 SMART AAA_5 973 1110 IPR003593 -
Dod09g0151 1241 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 75 363 - -
Dod09g0151 1241 MobiDBLite consensus disorder prediction 542 567 - -
Dod09g0151 1241 Coils Coil 897 917 - -
Dod09g0151 1241 MobiDBLite consensus disorder prediction 285 351 - -
Dod09g0151 1241 ProSitePatterns AAA-protein family signature. 1080 1099 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0151 Dod-Chr9 2173353 2182458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0151 936 1185 Calmodulin-binding Proteins AT3G56690 40.467 4.13e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0151 - - gmx:100780098 2021.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0151 09 2173353 2182458 Dod09g0151 09 2173353 2182458 ECH
Dod05g1501 05 39921514 39939968 Dod09g0151 09 2173353 2182458 PCT