Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0138 ATGGAGAACAACAACAACAACAACCCCCAGCACCAGCAAGCCCAATCAGGCCCATACCCAGGCCCAGCACCACCATCAGCGGCCCCATTCCACCACCTGCTCCAGCAGCAGCAGCAGCAGCTCCAGATGTTCTGGTCCTACCAGCGCCAAGAGATCGAGCAAGCGAACGACTTCAAGAACCACCAGCTCCCTCTCGCCCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCCGCCGAGGCCCCAATCCTCTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACCATCCGCTCCTGGCTCCACGCCGAGGAGAACAAGCGCCGCACCCTCCAGAAGAACGACATCGCCGCCGCCATCACCCGCACCGACATCTTCGACTTCCTTGTCGACATCGTCCCCCGCGACGATATCAAGGATGATGCTGCTGCGCTTGGTGGGATTGTTGCTGCTGCCACCGCTAGTGGGGTGCCGTACTATTATCCGCCCATGGGCCAGCCCGCCGGCCCGCCTGGTGGCATGATGATCGGGAGGCCCGCGGTGGACCCTGCCACCGGGGTTTATGTGCAGCCGCCTTCGCAGGCATGGCAGTCTGTTTGGCAGGCTGCTGCCGATGATGGGAGCTATGGCAGTGGTGGGAGCGCCGGACAGGGCAATCTCGATGGCCAGAGTTGA 690 0.6232 MENNNNNNPQHQQAQSGPYPGPAPPSAAPFHHLLQQQQQQLQMFWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDDIKDDAAALGGIVAAATASGVPYYYPPMGQPAGPPGGMMIGRPAVDPATGVYVQPPSQAWQSVWQAAADDGSYGSGGSAGQGNLDGQS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0138 229 Pfam Core histone H2A/H2B/H3/H4 5 125 IPR007125 GO:0003677
Dod09g0138 229 SUPERFAMILY Histone-fold 4 134 IPR009072 GO:0046982
Dod09g0138 229 MobiDBLite consensus disorder prediction 204 229 - -
Dod09g0138 229 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 229 - -
Dod09g0138 229 MobiDBLite consensus disorder prediction 1 17 - -
Dod09g0138 229 Gene3D Histone, subunit A 29 140 IPR009072 GO:0046982
Dod09g0138 229 MobiDBLite consensus disorder prediction 1 29 - -
Dod09g0138 229 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 7 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0138 Dod-Chr9 2071741 2076225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0138 27 228 CCAAT-HAP5 Transcription Factor Family AT3G48590 87.864 7.86e-111 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Dod09g0138 Histone 7.6e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0138 - - pop:7454724 296.589