Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod09g0125 | ATGTTCTCTACCTCATCCACACCACCTGCTTCTCATTCTGATTTTAAAGAAGCCTATAATTCTACTGTTGATCATCATGTTGACAAGGAACACGTATTAAGCATTCAAAGGAAGGCCATATCAGCCCAGAAAGAAAGTGACAGCAAAGAGATCAAGCAACCCAGACACGTATTTCATACAAGGAGTCAGGTAGATGTGCTGGACGATGGTTACCGGTGGAGAAAATATGGGAAAAAGATAGTGAAAAACAATAAATTCCCAAGAAGTTACTATAGATGCTCTCATCAAGGTTGCAATGTGAAGAAACAAATCCAACGCCAGTCCGAAAATGAACAAATCGTGGTGACAACCTATGAAGGAATACATACACACCCTGTTGAGAAGTCATCTGAAAGCAGCTTCGAACAGATCTTGGGAAGGCTGCTCATAAGCAACTTAGCTACCCTCTACACCCCCAAATTAAGTTAG | 468 | 0.4124 | MFSTSSTPPASHSDFKEAYNSTVDHHVDKEHVLSIQRKAISAQKESDSKEIKQPRHVFHTRSQVDVLDDGYRWRKYGKKIVKNNKFPRSYYRCSHQGCNVKKQIQRQSENEQIVVTTYEGIHTHPVEKSSESSFEQILGRLLISNLATLYTPKLS* | 156 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod09g0125 | 155 | ProSiteProfiles | WRKY domain profile. | 62 | 127 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dod09g0125 | 155 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 1 | 142 | IPR044810 | GO:0003700 | |
Dod09g0125 | 155 | Gene3D | WRKY domain | 54 | 120 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Dod09g0125 | 155 | SUPERFAMILY | WRKY DNA-binding domain | 59 | 126 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Dod09g0125 | 155 | SMART | WRKY_cls | 67 | 126 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dod09g0125 | 155 | Pfam | WRKY DNA -binding domain | 68 | 125 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dod09g0125 | 155 | PANTHER | WRKY FAMILY TRANSCRIPTION FACTOR | 1 | 142 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod09g0125 | Dod-Chr9 | 1926073 | 1927910 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod09g0125 | 55 | 143 | WRKY Transcription Factor Family | AT5G13080 | 68.539 | 1.83e-44 | 141 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Dod09g0125 | WRKY | 4.7e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod09g0125 | - | - | gmx:100796070 | 191.43 |