Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0117 ATGTTAACTATGGGCTCCGTGAAGGGAAAATGGAAGAAAAACCTGATTTCGAAGGCATGGGAACGTTGCCAATCATTTGGAGCAGGCACCAGCAACAAGAAGAGGTCACAATTGAAAGCTTCTTCATCAAAATCATTGCCAGCGAATTATAATGATCATGATGACAACAAAAACAAGAAGAAGGGTCAAACGATAGCACCTAATGGTAGCTTTTCAGTGTATGATGGACCGGAGAGGCAAAGGTTTGTGGTGAAGACCGAGTTTGCAAGCCACCCACTATTCAGGATGCTGCTAGAAGAAGCAGAGATGGAATATGGGTTTGGCAGTGATGGCCCCATCTGGCTTCCTTGCACCGTTGATTTATTCTACAAAGTGTTGGCCGAGATGGATGCAGGTCAAGAAGAAACTAAAAATTGTAATCGTAGAATAAGCTTTACAAAGGCCATGGGGTATTCTTCTCATGTTCTTCTAAGTCCTGCACGTTTTCTTTGTTACACGAATAATAGTGGCGATCATGGTGAATATAATAAGGTTATGGATTCCGAAATGCTGAAGATGAACCATTTTCAGTAA 573 0.4188 MLTMGSVKGKWKKNLISKAWERCQSFGAGTSNKKRSQLKASSSKSLPANYNDHDDNKNKKKGQTIAPNGSFSVYDGPERQRFVVKTEFASHPLFRMLLEEAEMEYGFGSDGPIWLPCTVDLFYKVLAEMDAGQEETKNCNRRISFTKAMGYSSHVLLSPARFLCYTNNSGDHGEYNKVMDSEMLKMNHFQ* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0117 190 MobiDBLite consensus disorder prediction 28 70 - -
Dod09g0117 190 PANTHER SMALL AUXIN-UP RNA-RELATED 11 166 - -
Dod09g0117 190 Pfam Auxin responsive protein 34 127 IPR003676 GO:0009733
Dod09g0117 190 MobiDBLite consensus disorder prediction 28 49 - -
Dod09g0117 190 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 11 166 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0117 Dod-Chr9 1730042 1730614 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0117 66 126 Calmodulin-binding Proteins AT3G43120 49.180 7.37e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0117 K14488 - gmx:100793967 180.259