Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0116 ATGTTAATGGGCTTTGTGAAGGGGAAATGGGAGAATTTGAAGGCATGGGAACGTTGCCGATCATTTGGAGCAGGCACTGGCTACAACAAGAGGTCATATTATAATGATCATGACGATAAGAAGAATAAGGGTCAAACTATAGCACCCAATGGTTGCTTTCCAGTGTATGTTGGAACGGAGAGGCGAAGGTTCGTAGTGAAGACGGAGTTTGCAAGCCATCCACTATTCAGGATGCTGCTAGAAGAAGCAGAGATGGAATATGAGTTTGAAAGTGATGGCCCCATTTCGCTTCCTTGCACCGTTGATTTGTTCTACAAAGTGTTGGCTGAGATGGATGCAGGTCAAGAAGAAATCAATATTCCTAATCGTAGAAGCTTTGCAAAGGCCAAGGGGTACTCTCCTCTCGTTCTTCTAAGACGTTTTCTTTGTTACACGAATAATAGTGGTCATGGCGAATATAAGGTTATGGATTCCGAAATGCTGAAGATGAACTAA 495 0.4303 MLMGFVKGKWENLKAWERCRSFGAGTGYNKRSYYNDHDDKKNKGQTIAPNGCFPVYVGTERRRFVVKTEFASHPLFRMLLEEAEMEYEFESDGPISLPCTVDLFYKVLAEMDAGQEEINIPNRRSFAKAKGYSPLVLLRRFLCYTNNSGHGEYKVMDSEMLKMN* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0116 164 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 12 139 IPR003676 GO:0009733
Dod09g0116 164 PANTHER SMALL AUXIN-UP RNA-RELATED 12 139 - -
Dod09g0116 164 Pfam Auxin responsive protein 36 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0116 Dod-Chr9 1718453 1719178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0116 48 108 Calmodulin-binding Proteins AT3G43120 49.180 7.62e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0116 K14488 - gmx:100793967 161.77