Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0107 ATGGAGAAGATGAAGTTTGTTATTAGGAATGGGGCCATTAATATCAACGGAGGTGTGAGCAGGTTGCCTCCGGGCTTTCGTTTCCAGCCAACAGACGAGGAGCTTGTGTTTCAGTACTTGAAATCTAAGGTCTTCTCTTCCCAGTTGCCTGCTGCTTCTATCATTCCTCAGATCAATGTATGCAAATACGAACCTTGGGATTTGCCAGAACTATGCAAACGAGTTAGGGGATTGGGTTCTGTGTCGCATATTATGAAGAAAAGAAGTATAGAAAGTGATCAACAAGACAACACTGCTCATCATCACATGCCGAAGAACAGTAATAATAATAATAATGCAGTGAAGAATGTTTTTGATGATGAGGTGGCTAAGCCAAGATTCTTTGATTTTATGAGGGTAAACAATTCAGCTCCGGGTCCAATCCATTCCTCTGCGTCCTCATCTTGTTCAAGTTCTTCTAGCTACATAACAGAGGTCTCTTCATTAGACCACGAAGAAACAAGCGGCTATGTTGATTTCTAA 522 0.4157 MEKMKFVIRNGAININGGVSRLPPGFRFQPTDEELVFQYLKSKVFSSQLPAASIIPQINVCKYEPWDLPELCKRVRGLGSVSHIMKKRSIESDQQDNTAHHHMPKNSNNNNNAVKNVFDDEVAKPRFFDFMRVNNSAPGPIHSSASSSCSSSSSYITEVSSLDHEETSGYVDF* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0107 173 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 14 73 - -
Dod09g0107 173 SUPERFAMILY NAC domain 16 74 IPR036093 GO:0003677|GO:0006355
Dod09g0107 173 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 14 73 - -
Dod09g0107 173 Gene3D NAC domain 31 140 IPR036093 GO:0003677|GO:0006355
Dod09g0107 173 MobiDBLite consensus disorder prediction 91 113 - -
Dod09g0107 173 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 85 173 - -
Dod09g0107 173 ProSiteProfiles NAC domain profile. 22 173 IPR003441 GO:0003677|GO:0006355
Dod09g0107 173 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 85 173 - -
Dod09g0107 173 Pfam No apical meristem (NAM) protein 23 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0107 Dod-Chr9 1452102 1454603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0107 15 69 NAC Transcription Factor Family AT5G13180 70.909 5.77e-21 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod09g0107 NAM 2.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0107 - - aprc:113868555 100.523