Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0104 ATGGGTTGCGTGCTCGGGAAGCCTGCCGGTACTGGAGCTCGGCCCCATCACCGGAGCGAACAGCGAAGCTCCGCTCCCGACGGAGGCGAAAATGCAGTTAGGGTTCGACCGAAGCAGAGGAACCGTAACTCCGGCGATTTTCCGGTGAGTTTTCCGGCGCCGGAGCGCCGGAAACTGAGGCTCGATCCGTGCGCCGTGACGCAGCAGGGATGGCCGTCGTGGCTGATGGCTGTCGCCGGCGATGCAATCGGCGATTGGACCCCTCGTCGCGCCAACACCTTCGAGAAACTCGCTAAGATTGGGCAAGGGACTTATAGCAATGTGTATAAGGCTAGGGACCTTGTGACTGGGAAGATTGTGGCTTTGAAGAAAGTTAGGTTTGATAATTTGGAACCAGAGAGTGTGAGGTTCATGGCAAGGGAGATTCTTGTGTTGAGAAAGCTTGATCACCCAAATGTTCTGAAGCTTGAAGGATTGGTTACTTCTAGAATGTCTTGCAGCCTTTACTTGGTTTTTGAGTATATGGTACATGATCTTGCAGGCCTTGCAGCTGGCCAAGGTGTTAAGTTCACTGAACCTCAGGTTAAATGCTTTATGAAGCAATTACTTTCTGGCCTCGAGCATTGCCACAGTCGAGGTGTACTGCACCGAGATATAAAGGGTTCCAATCTGCTCATTGACAACGAAGGAATCCTTAAAATTGCAGATTTTGGACTGGCGACTTTCTATGACCCTAAGCAAAAGCAGTCCATGACAAGCAGAGTTGTGACTCTTTGGTATCGTCCCCCTGAGCTTCTTCTAGGGGCTACATTTTATGGTGTTGGGGTTGACCTTTGGAGCGCTGGTTGCATCTTGGCAGAGCTGCTTGCTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAACAACTGCACAAAATATTTAAGTTATGCGGCTCTCCCTCTGAGGAATATTGGAAGAAATATAGATTGCCAAATGCTACTATCTTTAAGCCACAGCAGCCATATAAACGATGCATCTCAGAAACTTTCAAGGATATTCCTCCATCTTCACTACCTCTAATTGAAACTCTTCTTGCAATAGATCCTTCCAATCGTGGCACTGCCTCAGCTGCTCTAAATAGCGGATTCTTTAACACTGAGCCCTATGCTTGTGAACCATCAAGTTTACCGAAGTATCCTCCCAGCAAAGAACTGGATGTAAAACTGAGGGATGAAGAAGCAAGAAGGCAAAAAGCTTTAAGTGGAAAGGCTAATGATGGTGCCAAAAGAGTCAGAGCACGTGAGCGTGGACGGGCCATTCCAGCCCCTGAAGCCAACGCAGAGATCCAAACAAACCTAGATAGGTGGCGAGTTGTGAACCATACAAATGCCAAAAGCAAGAGTGAGAAATTTCCACCTCCTCATCAAGATGGAGCTGTTGGGTATCCACAGGATGCACCGCAAAAGGGACCTGTTTCATTTGGCGCCACTGATACTTCCTTTGGCTCAGGGATATTTGATGCAAAACCATCTGGACCTGTTGGAACTCATGCTGCTGCAGGACCTTACAGAGGGAGGAAAACCAGAAAAGAAGAGTCCCAAGCTGCCTCATCATGGAAATTTATGCGTACATTCAAACCATCAACAGTTGGCCTTTCAATGGATTTGTTATTTAGGAGCAAATAA 1668 0.482 MGCVLGKPAGTGARPHHRSEQRSSAPDGGENAVRVRPKQRNRNSGDFPVSFPAPERRKLRLDPCAVTQQGWPSWLMAVAGDAIGDWTPRRANTFEKLAKIGQGTYSNVYKARDLVTGKIVALKKVRFDNLEPESVRFMAREILVLRKLDHPNVLKLEGLVTSRMSCSLYLVFEYMVHDLAGLAAGQGVKFTEPQVKCFMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFYDPKQKQSMTSRVVTLWYRPPELLLGATFYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATIFKPQQPYKRCISETFKDIPPSSLPLIETLLAIDPSNRGTASAALNSGFFNTEPYACEPSSLPKYPPSKELDVKLRDEEARRQKALSGKANDGAKRVRARERGRAIPAPEANAEIQTNLDRWRVVNHTNAKSKSEKFPPPHQDGAVGYPQDAPQKGPVSFGATDTSFGSGIFDAKPSGPVGTHAAAGPYRGRKTRKEESQAASSWKFMRTFKPSTVGLSMDLLFRSK* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0104 555 MobiDBLite consensus disorder prediction 1 52 - -
Dod09g0104 555 MobiDBLite consensus disorder prediction 409 429 - -
Dod09g0104 555 ProSiteProfiles Protein kinase domain profile. 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0104 555 MobiDBLite consensus disorder prediction 458 530 - -
Dod09g0104 555 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 66 537 - -
Dod09g0104 555 Pfam Protein kinase domain 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0104 555 Gene3D Transferase(Phosphotransferase) domain 1 177 417 - -
Dod09g0104 555 PANTHER CELL DIVISION PROTEIN KINASE 66 537 - -
Dod09g0104 555 SMART serkin_6 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0104 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Dod09g0104 555 Gene3D Phosphorylase Kinase; domain 1 81 176 - -
Dod09g0104 555 CDD STKc_CDK9_like 94 378 - -
Dod09g0104 555 SUPERFAMILY Protein kinase-like (PK-like) 88 383 IPR011009 -
Dod09g0104 555 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0104 Dod-Chr9 1428424 1432500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0104 86 412 Core Cell Cycle Gene Families AT5G10270 51.143 1.32e-114 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod09g0104 Pkinase 1.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0104 K08819 - gmx:100807756 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0104 09 1428424 1432500 Dod09g0104 09 1428424 1432500 ECH