Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0102 ATGGGTGATGGCCACCAACATGGAAACAGTAGGCATACAATGGACTACTACAGAGGAGCACATTCACCGTGGAATACGGCTTCCCAGCATCAAGCAAAGGAACCAAATGCACTAGTTTTGAATAAGAAAATTAGGTCCATTATGGCTGAACGTGCAATTCTAGAACTTGAAGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTAGAGATGAGGCCCTTCGTCAGAGGGATGAAGCACTTGCTGAGAGGGACAATGCCCTAAGGGAGCGGGATAATGCCCTTGCCGCCCTTGAAAATCGGGGAAATGCTGCCAACTTCTCATTAAGCAGTGGAGGTCAACGTGGATCAAAGCGAATGCACCATCCTGCAAACTATCCGGGGAACATGACAGAAGCCGCATACAGCACAAAGGATGTGCCAATAACCGATGCCTTCCCGGTAACTGTTGTACCTTCTGAAGCTATCAAATCCCATCTGGCTAAGAAAACAAAGGAGAACAAAACAATCACTTCTAAGGCATCAAAGTCACCTAGCAAAGGAAAGAAAATGGGCGAGGATTTAAATAGGCGGGCTTCTTGTGAAGGGATGAAGATCAAATCAGAATGGGATAGGCAAGATGTTGGCTTGAATTTGGTTACCTTTGATGAAACTACCATGCCTGTCCCGGTTTGCACATGCACTGGAGTACCACGTCAGTGCTACAAATGGGGTAGTGGTGGATGGCAGTCATCTTGTTGTACCACCACCTTGTCAATGTATCCGCTACCACAGCTTCCTAACAAGCGCCATGCCCGTATTGGGGGGCGAAAGATGAGTGGCAGCGTCTTTACAAGGCTGCTCAGTAGGTTTGCAGCACAAGGCCACGATTTATCTATACCATTGGATCTCAAGGACTACTGGGCCAGACATGGAACAAATCGCTACATTACCATCAAGTAG 942 0.4724 MGDGHQHGNSRHTMDYYRGAHSPWNTASQHQAKEPNALVLNKKIRSIMAERAILELEAAISEKNEALAARDEALRQRDEALAERDNALRERDNALAALENRGNAANFSLSSGGQRGSKRMHHPANYPGNMTEAAYSTKDVPITDAFPVTVVPSEAIKSHLAKKTKENKTITSKASKSPSKGKKMGEDLNRRASCEGMKIKSEWDRQDVGLNLVTFDETTMPVPVCTCTGVPRQCYKWGSGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVFTRLLSRFAAQGHDLSIPLDLKDYWARHGTNRYITIK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0102 313 PANTHER - 1 313 IPR010409 -
Dod09g0102 313 Pfam GAGA binding protein-like family 18 313 IPR010409 -
Dod09g0102 313 SMART GAGA_bind_2 1 313 IPR010409 -
Dod09g0102 313 PANTHER PROTEIN BASIC PENTACYSTEINE4 1 313 - -
Dod09g0102 313 Coils Coil 313 313 - -
Dod09g0102 313 MobiDBLite consensus disorder prediction 161 187 - -
Dod09g0102 313 Coils Coil 49 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0102 Dod-Chr9 1408961 1413517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0102 1 313 BBR or BPC Transcription factor family AT2G21240 57.729 2.78e-126 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Dod09g0102 GAGA_bind 9.1e-96 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0102 - - gmx:100785547 498.819