Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0095 ATGTCCAACCAGATGTGGGTGTGGGTGTGGGAGCTGCAGGGCAAAGGAGAGGAAAAGCAATTGGAACTTGAAGAAACTGAGGAGCCTGAGCCTGACTCTGATTCCCCATTGCCACTCACAGTTACTTCCCGGGTATTGTATATGTTGGGAGACATAGCGTCAGGGCCTGCGTTGAGGTTCACGCAATGGCTCCAATCGGTTCGCAACCGTAAACACTCTTCCAAGTACCGGTCCTCTGGCTTCCCTCGCCGTCCTCCTTCCACCATGCCTTCCTCTAGCCATGGAGAATATATTGAGGATGCAAGAAGCGATCAGTCTCCCAAACAGACTGAAATTAGTTTGTGGGAGAGGCTTGGTAAAGCTGAAATGTTGGACATTGAGTTGAGCTCGTTTTCATGGGAGAGGCTCTCTTCGCTTCACCATACTGAGCACAGCAGCATCACTGAACATTCTGAGGATGAAATGAACAAAGCTCTCGAGGTAACTGTAAATTCTGGGGGCGTTGTCTTCTTTGCCTTTTTCAACAGCCTTGGGAGTGACGATGATTTTCCAAAAGAAGCAGCAGCTGTTATAAAGATATCATCATCGAGAATGGCAACACAGTCTGAACGCCTTGGTTATGAATTTGCCAAATGCTTGGGAGTCCGAACGCCACAGGCTAGAGTCATTCACAATGCTAGTTTAGAGTGGCTCCAAATAAAGGAAGCTACAGAAAGAGCTAGAGATACAGCAAGTGCTAAGGGAGATGAAATCGGTGAAATGACTTGCTCTGAACTTTTGGAAGCACTTGAGCTTAGCCGGTGTCTCTATTTTATGAGTTATGTACATGGTTCACCGTTGCTTGAAAGTCCTTCTGCTTTTGAATCACTGGAATCTGCAAAAAGAACATCAGCAGCACTTGGCAGGGTAATGATGTTGGACCTTGTCATCAGAAATGAAGATAGACTCCCTTGCCGCCAGCTAAGGTGGCGTGGGAACTCTGCAAATTTGTTGGTGGCTGAAAAGTTATTATCTGCAAATACAGAGACACTAGGAGAAGCTTTTGATTCTGCGATGAAGCAATATAAACCCAGGGTGATTAGGGCACTTCAAAACGAAAGAAGGTCAGCTTCAGTAGATAGAAAATTGAGTTCTTATAATCCTACATTGATATCACAACGCTCTGATGTTTCAGAGATCATGGAATCACCAATATCCACTGACGTAAGCCTTAAAAGTCAAACATCAGGCGAATCACTGTGTACTAACTTTAACATTGTAGCTATTGATTCTGGTGTTCCTCGCCGACCCCCTACTGGAAAACGTGCAGATGATCAGGTTAATTATCCTAAGTTGGTTGAGTTACTACTCAACAGTTCTGAGTTCTCCTCTAGTCTGTTATATGATATAACTGGAGGGAGATTAGGAAGTCCTCCACCAGAAGACATAAATGCAACAACTGATGTTCATTCACGTGATGTAACGGCAGTAGTTCATGAGTTCCGTAATAGTTTCCGTGCTGCTCTTAGGGATGTGCAGGGATTTTATATATTCTTATTCACACTACACCAAAAACTTGATAACCTGTTACGATCATTTATAAATATCAAAATATCATCTGGAGAATCTGAAAAAGAGGATTTAGTGATTCCACACTCACATTCACCAATTGTTGCTGGTAGTACTCCCGCTCCATCAAGTAAAGATACCTCTTCTCATGATAACCATCACGATTTTAGTGACTCAGGATCACAAAGAACAGCTCCAAGGGCATTATCATCTTCAGGCAGTAGAGATTGTTGTGACTCTACTTCTGCATCAAGAGAAGGTTTTCATGGGAGGCTCTCAAAAGGAAGTGGGGAGCCACTTAGTAGTGTTCGCTTAACAGCTAAGCTCCGTGACTTCCATAAATTTGCAAAGGTAGATACTGAATCTGGTAAAGAATTAGAACAGTGGAATGAAATGCTTAAAAATGATGTCATGAAGTTATGCCACGAGAACAATTTCAATACAGGTTTTTTTGAGGGTAGTGATGACAACTGTGTTGTTGATGCATATGAATTGAAGGTTAGACTTGAGCATGTCCTTGAGAGGATTGTATTGATATCTGAGGCTGCAAATACAGAGAGACCATCTGCAGTTACAAGTAGTCTGTACGTTGGTGGAGCACTAGCTGCAAGATCCATATACACATTGCAGCACTTGGGAATCACACATATTTTGTGTTTGTGTAATAATGAAATTGGACAGGCAGATTCTCAGTTTCCTGATCTGCTTACATACAAAAATTTCTCTGTGTGTGACGATGAAGATTCTAACATTCAGCAGCATATTTGA 2316 0.4262 MSNQMWVWVWELQGKGEEKQLELEETEEPEPDSDSPLPLTVTSRVLYMLGDIASGPALRFTQWLQSVRNRKHSSKYRSSGFPRRPPSTMPSSSHGEYIEDARSDQSPKQTEISLWERLGKAEMLDIELSSFSWERLSSLHHTEHSSITEHSEDEMNKALEVTVNSGGVVFFAFFNSLGSDDDFPKEAAAVIKISSSRMATQSERLGYEFAKCLGVRTPQARVIHNASLEWLQIKEATERARDTASAKGDEIGEMTCSELLEALELSRCLYFMSYVHGSPLLESPSAFESLESAKRTSAALGRVMMLDLVIRNEDRLPCRQLRWRGNSANLLVAEKLLSANTETLGEAFDSAMKQYKPRVIRALQNERRSASVDRKLSSYNPTLISQRSDVSEIMESPISTDVSLKSQTSGESLCTNFNIVAIDSGVPRRPPTGKRADDQVNYPKLVELLLNSSEFSSSLLYDITGGRLGSPPPEDINATTDVHSRDVTAVVHEFRNSFRAALRDVQGFYIFLFTLHQKLDNLLRSFINIKISSGESEKEDLVIPHSHSPIVAGSTPAPSSKDTSSHDNHHDFSDSGSQRTAPRALSSSGSRDCCDSTSASREGFHGRLSKGSGEPLSSVRLTAKLRDFHKFAKVDTESGKELEQWNEMLKNDVMKLCHENNFNTGFFEGSDDNCVVDAYELKVRLEHVLERIVLISEAANTERPSAVTSSLYVGGALAARSIYTLQHLGITHILCLCNNEIGQADSQFPDLLTYKNFSVCDDEDSNIQQHI* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0095 771 Gene3D - 282 429 IPR036940 GO:0016301
Dod09g0095 771 Gene3D Protein tyrosine phosphatase superfamily 685 771 IPR029021 -
Dod09g0095 771 MobiDBLite consensus disorder prediction 80 94 - -
Dod09g0095 771 MobiDBLite consensus disorder prediction 74 109 - -
Dod09g0095 771 CDD DSP 704 771 - -
Dod09g0095 771 Pfam Actin-fragmin kinase, catalytic 111 390 IPR015275 -
Dod09g0095 771 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 14 768 IPR035010 GO:0004721|GO:0009737|GO:0043622
Dod09g0095 771 SUPERFAMILY Protein kinase-like (PK-like) 62 439 IPR011009 -
Dod09g0095 771 MobiDBLite consensus disorder prediction 19 38 - -
Dod09g0095 771 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 14 768 - -
Dod09g0095 771 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 702 770 IPR029021 -
Dod09g0095 771 MobiDBLite consensus disorder prediction 577 597 - -
Dod09g0095 771 MobiDBLite consensus disorder prediction 547 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0095 Dod-Chr9 1276963 1282307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0095 13 768 Protein tyrosine phosphatase (PTP) family AT5G23720 62.029 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0095 K14165 - gmx:102661225 1015.37