Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0078 ATGGACCCTGACGCCTTCACAACAAGCCTATTCAAGTGGGACCCACGCGCCATCCTCCCAGCTCCACCGGCGGCCTCGGCAGCCGCCACCCGGTCGCCGCTGCTTGACTACACGGTGGCTGCTCCGGTGGCCCCTACAGTGGCGGCGTTTCCGGCGGCGAGGGGAACGACGACGAGGGAGTTGGGGGGTTTGGATGAGCTGTTCCAGGCTTACGGGATAAGGTACTACACGGCGGCGAAGATAGCGGAGCTAGGGTTCACGGTGAGCACGCTGTTGGACATGAAGGACGAGGAGCTGGAGGACATGATGACCAGCGTCTCGCAGATCTTCCGGTGGGACCTCCTCGTAGGCGAGCGGTACGGCATCAAGGCCGCCGTCAGGGCCGAGCGGAGGCGCCTCGATGAAGAGGACACCAGGCGCCGCAACGTCCTCTCCACCGACACCGCCACCACCAACGCCCTTGACGCTCTCTCTCAAGAAGGGTTGTCAGAGGAACCGGTGGTGCAACAAGAGAAGGAGGCGGTGGGGAGCGGGGGAGGGAACACGTGGGAGGTGGGAGGCGGGGATGAGAGGAGGATGCAGCAGCAACAGAGGAGGAGGAGAAGGACCAAGTTGAAGGCGAGTAGTGGTCTCCATCATCATCACCGTCTTCACCACCATGACGACGAGAACGAGGATCCAGAAGATCATGAGGAGGGAGAAGACAACGTCGACATTGAAGGGAACCACAACAACGGTGGTGGTGGTGAGAGGCAAAGGGAGCACCCTTTCATAGTGACGGAGCCTGGGGAGGTTGCACGTGGCAAGAAGAACGGACTCGATTATCTCTTTCACCTCTACGAGCAATGCCGTGAGTTCTTGATTCAGGTTCAGGCTATTGCCAAGGACCGAGGTGAAAAATGCCCCACCAAGGTGACAAACCAGGTGTTCAGGTACGCGAAGAAGGCAGGGGCGAGCTACATCAACAAGCCAAAGATGCGACACTACGTGCATTGCTACGCCTTGCACTGCCTCGACGAGGAAGTTTCGAACGAGCTGAGGAAGGGCTTCAAGGAGAGAGGGGAGAACGTAGGGGCGTGGAGGCAAGCGTGTTACAAGCCCCTCGTGGCCATAGCAGCGCGTCAAGGTTGGGACATCGACGCCATATTCAACGCGCACCCTCGCCTCTCCATATGGTATGTCCCCACCAAGCTCCGCCAGCTTTGTCACGCCGAGAGGAACAGCGCCGCCGCAGCTGCAGCTGCTGCAGCTTCGAGCTCTGTCTCTGTCGGCAGTGGCCACCTTCCTTTCTAA 1293 0.5994 MDPDAFTTSLFKWDPRAILPAPPAASAAATRSPLLDYTVAAPVAPTVAAFPAARGTTTRELGGLDELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMTSVSQIFRWDLLVGERYGIKAAVRAERRRLDEEDTRRRNVLSTDTATTNALDALSQEGLSEEPVVQQEKEAVGSGGGNTWEVGGGDERRMQQQQRRRRRTKLKASSGLHHHHRLHHHDDENEDPEDHEEGEDNVDIEGNHNNGGGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRKGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAAAAAAAAASSSVSVGSGHLPF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0078 430 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 245 410 IPR035209 GO:0003677
Dod09g0078 430 Pfam Floricaula / Leafy protein SAM domain 60 137 IPR035079 -
Dod09g0078 430 MobiDBLite consensus disorder prediction 197 215 - -
Dod09g0078 430 MobiDBLite consensus disorder prediction 144 158 - -
Dod09g0078 430 Gene3D Protein LEAFY 247 416 IPR038276 -
Dod09g0078 430 PANTHER PROTEIN LEAFY 1 420 IPR002910 GO:0003677|GO:0006355
Dod09g0078 430 MobiDBLite consensus disorder prediction 133 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0078 Dod-Chr9 1072751 1075890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0078 1 425 Orphan Transcription Factor Family AT5G61850 61.765 2.65e-157 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Dod09g0078 C_LFY_FLO 1.8e-108 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0078 - - gsj:114416001 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0078 09 1072751 1075890 Dod09g0078 09 1072751 1075890 ECH