Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0049 ATGGAACAGTGGGGTGTTCGTCATCGAGTAATGTTCATTGGTCCGCATAAGGATGAGGGATATGAAAGTCAACTTCCTTCTGATATTCCTAAGGAAGAGGAATCTTATGATGAAGAAGAAGAAAAAATCATTAAGACTGAATCTGTCTTTTTGCCAGAGACCAAGAAAAGGAAGCGAGTTAGCCTTAGTCAGCTTAGTGAGGTGAAAGAGGAGTCTTGTGGGAAGCAAAGTAGTCGCAAGCCTAAAACAAAGAAGCAAGAAAGTAGGGATAGATGGTCAGCCGAGAGGTATAAGTTGGCTGAGCAAAGCATGTGGGAGGTTTTAAAGGCTGAAGGTGCAACTTTTGAAACTCCAATAACCCGACCTGCATTGAGAATGGCTGCTCGTAAACACATTGGCGATACTGGACTTTTAGACCACTTACTGAAGCACATTGATGGTAAAGTAGCACCTGGGGGAACTGAGCGGTTTCGAAGATGGTTCAACACCAAAGGAATCATGGAGTATTGGTTGGAGAGTGCTGACTTGGACAAGGTTCGCCAGGAGGCAGGGGTGCATGACCCTTACTGGATACCACCATCTGCATTTAGGGCAGGCAGTGCCTCCTCTCAGAATACTGATTCTTCTGATGAATTGAAACTGCTTAAAATAGAAATGGCTCAAATGAAGAGAGATATGCAAGAGCTTATTACCAAGCAGAAACCGAAAAGTGAAAGTAGTTTGATGGAGGAGTCTCACAAGGACTTGGTGAAGTGGAAAGCTGCAATTGATCATTGCCTAACTGAAATCATGGCTTCTGTGAAGGGTGTGCAGGGCAAGTATGGTGAATTTGCAACTTGGAAAACTACGGTTGAGCAACAGCTTGCGGAAATAACAATCAAATTGAGTGATCTCAAAGCATCAAGGGAATGCCCACCTTTTAGTCCTCCTTCAGAAAGGTGGAAAGATTGGATAGAAAGCACCAACCTAGACAATATTCCGGAAGATGAAATTGCAACTTGGATTGGGAGTTCCGGGTTGCTTAATGATCCGCAAGAGGTTGTACTTGAAGAGCCCAACTCAGCCCTACCAACTCAGCTACCTAATGATCTGACTAACAAGAGGAGTAGTGAACTGCTGGAGTTGGTGCCCCCGAAACACGAGGATCAACCTAATGTGACCCCTGACTCTTCTACAACTGTTAATTCGAAGTCAGACATTGACAACTCATTGATAATGTTTCAGGAGATGTTCATGGATATATTCAAATGGAAAGAAAAAATTGAGCAGCAGATGTTGGAGTTATCAAACACTGTATATGGTATGCTGGCAATGAAGTAG 1320 0.4348 MEQWGVRHRVMFIGPHKDEGYESQLPSDIPKEEESYDEEEEKIIKTESVFLPETKKRKRVSLSQLSEVKEESCGKQSSRKPKTKKQESRDRWSAERYKLAEQSMWEVLKAEGATFETPITRPALRMAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTKGIMEYWLESADLDKVRQEAGVHDPYWIPPSAFRAGSASSQNTDSSDELKLLKIEMAQMKRDMQELITKQKPKSESSLMEESHKDLVKWKAAIDHCLTEIMASVKGVQGKYGEFATWKTTVEQQLAEITIKLSDLKASRECPPFSPPSERWKDWIESTNLDNIPEDEIATWIGSSGLLNDPQEVVLEEPNSALPTQLPNDLTNKRSSELLELVPPKHEDQPNVTPDSSTTVNSKSDIDNSLIMFQEMFMDIFKWKEKIEQQMLELSNTVYGMLAMK* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0049 439 MobiDBLite consensus disorder prediction 15 40 - -
Dod09g0049 439 Coils Coil 205 232 - -
Dod09g0049 439 MobiDBLite consensus disorder prediction 61 92 - -
Dod09g0049 439 MobiDBLite consensus disorder prediction 15 31 - -
Dod09g0049 439 MobiDBLite consensus disorder prediction 378 397 - -
Dod09g0049 439 MobiDBLite consensus disorder prediction 72 92 - -
Dod09g0049 439 PANTHER PROTEIN DYAD 3 438 IPR044221 GO:0007131|GO:0051177|GO:0051321
Dod09g0049 439 PANTHER DYAD PROTEIN 3 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0049 Dod-Chr9 803638 808277 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0049 77 172 PHD Transcription Factor Family AT5G22260 37.113 5.60e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0049 - - gmx:100806484 660.603