Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0045 ATGTCGAGCTTTCACGTCGGCGGCAAGGTGGTGGACCGCGTCGATTTGCTGCGGAAGAAGCAACTGCCGTGGCGCGTCGACGTGTGGCCCTTCGCCGTCCTCTACGGCACCTGGCTAGCCACCATCCTCCCAAGCCTCGACTTCGTCGACGCCGCCATCGTTCTCGGCGCCCTTGTCTCTCTCCACATCCTCGCCTGGCTCTTCACCGGTTGGTCCGTTGATTTCAAGTGTTTCGCTCATTATTCCAAGGTTAAGAATATTCATCAAGCTGATTCTTGCAAGATAACGCCGGCGAAGTTTTCGGGTTCGAAAGAGGTCGTGCCGCTCCGATTTCGGAAAATTCCTGCAGGTTCTTCATCAGCGGTGGATCAGGAAGAGATTTACTTTGAGTTTAGAAAACAATGTTTTGTCTTCTCAAAGGAGAATGGGACTTTTTGCAAACTTACTTACCCTACAAAGGAAACAATTGGATGCTATCTCAAGAGTAGTGGTCATGGCTCTGAAGCTAAAGTTCTTGCTGCTACTGAGAAATGGGGGCGGAATGTATTTGATTATCCTCAGCCAACATTTCAGAAACTGATGAAAGAGCACTGCATGGAGCCTTTTTTTGTATTTCAGGTTTTCTGTGTTGGTCTCTGGTGTTTGGATGAGTATTGGTATTACAGTTTGTTCACTCTATTTATGCTGTTTATGTTTGAGTCAACCATGGCAAAAAGTCGGTTGAAGACTCTTACTGAGTTAAGGCGAGTTAGAGTTGATAGTCAGATCTTAATGGTACATCGCTGTGGCAAGTGGGTTAAACTCTCTGGTACGGATCTTTTGCCTGGGGATGTTATCTCTATAGGACGCTCTTCTGGTCAGAATGGAGAGGAGAAGTCTGTACCTGCAGACATGCTTTTATTGGCTGGAAGTGCAATTGTGAATGAAGCTATTCTCACAGGCGAGTCTACTCCTCAATGGAAGGTTTCAATAATGGGTAGGGGGATTGAGGAGAAGTTGTCAATAAGGCGAGATAAAAGTCATGTCTTATTTGGTGGAACTAAAATACTGCAGCACACTCCAGATAAGACCTTCCCTCTGAAAACCCCTGATGGTGGCTGCTTGGCTGTTGTCCTTAGAACGGGGTTTGAAACAAGTCAAGGAAAGTTGATGCGAACAATATTGTTCTCTACAGAAAGGGTTACTGCTAATAGCTGGGAAAGTGGACTGTTCATTTTATTCTTGGTTGTATTTGCTCTAATTGCTGCTGGTTATGTGCTCATCAAGGGGCTAGAAGATCCCACGAGGAGCAAGTACAAACTGATACTAAGTTGTTCTCTTATTGTTACTTCTGTGATACCTCCTGAGTTACCAATGGAATTATCAATAGCTGTTAATACTTCCCTGATTGCATTGGCACGGCGTGGAATTTTCTGCACAGAACCTTTTCGAATACCATTTGCTGGAAAGGTTGATATATGCTGTTTTGACAAGACTGGGACACTTACATCTGATGACATGGAATTTTCTGGAGTAGTTGGGTTGACAGGAACCACTGATTTGGAATTTGACATGAGTAGAGTGCCCGCGCGAACTTTAGAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCGCTTAAGGGGATTGATTGGAGTTATAAATCTGATGAGAAGGCTGTTCCAAAAAAGGGTAGTGGCCAGCCTGTCCAAATTGTTCAGCGGTACCATTTTGCATCTCACCTGAAACGAATGGCTGTTATTGTTCGCATTCAGGAGGAATTTTTTGCCTTTGTGAAGGGTGCCCCAGAAATTATTCAAGATAGGCTCATTGATGTACCACTATCATATGTTGAAACCTACAAAAAATACACACGTCAGGGGTCTCGTGTTCTTGCTCTGGCTTACAAGTCTCTTTCTGACATGACAGTCAGTGAAGCTAGAAGCTTGGATAGGGATGTAGTGGAGAATGGTCTTACTTTTGCTGGTTTTGTGGTATTTAATTGTCCTATAAGATCAGATTCGGCCACTGTTTTGTCTGAATTAAAAGGATCTTCACATGACTTGGTGATGATTACTGGTGACCAAGCTTTGACAGCTTGTCATGTTGCTAGCCAAGTTCATATTATATCAAAACCTACACTAATCCTTGGCCCAGCAAGTAATGGTGCGGGATATAAGTGGATGTCCCCTGATGAGACTGAAAACATACCCTTCAGTGAGAAAGAGGTTGAGTCTTTATCAGAAACTCATGATCTGTGTGTTGGAGGTGATTGCTTTGACATGTTGCAACAGACATCAGCTCATCTTCGAGTTATTCCATATGTCAAGGTGTTTGCCAGAGTTGCACCTGAACAAAAAGAACTTATCATGACCACTTTCAAGACTGTGGGACGGGTAACTTTGATGTGTGGAGATGGAACCAATGATGTTGGAGCATTAAAGCAGGCCCATGTAGGAGTTGCTCTTCTGAATGCTATGCCTCCAGCTCAAAGTGGAAACTCCTCTTCAGATTCTGCCACGGATGAAGGTTCTAAATCTGGCAAGCCAAAGAAATCCAAGTCTACACTAGAGGCATCTGGAAAGACTGCAAATCTTATTGGAGAAGGTACTTCAAAAGCCAAAGCTGCTTCAAAATCAGATTCTGCTAGCCACTCATCTGTTAATCGTCATCAGGCAGCTGCTGATATGCAACGACAGAAGCTCAAGAAGATGCTTGATGAGCTAAATGAGGAAGATGGTCGTGCACCTGTTGTCAAGCTTGGTGATGCCTCAATGGCATCTCCCTTCACTGCAAAGCATGCATCTGTTGCACCCACCACTGACATAATTCGTCAAGGTCGCAGTACCCTAGTGACAACCCTCCAGATGTTTAAAATTCTAGGCCTCAACTGCCTTGCCACTGCATATGTGTTGAGTGTCATGTACCTGGATGGTGTCAAACTCGGTGATGTGCAGGCCACAATAAGTGGTGTCTTTACTGCTGCCTTTTTCCTGTTCATCTCACATGCCCGCCCTCTCCCCACTCTTTCAGCTGAACGACCCCACCCCAATATCTTCTGTGCTTATGTCTTCCTTTCCCTCCTGGGGCAATTTTCTATTCACTTGCTTTTCCTCATTTCATCAGTGAAAGAGGCTGAAAAATACATGCCAGATGAATGCATTGAACCAGATGCAAGTTTCCATCCCAACCTGGTGAACACTGTCTCATACATGGTAAGCATGATGCTTCAGGTGGCCACTTTTGCTGTGAACTACATGGGCCATCCCTTCAACCAGAGCATCCCTGAAAACAAGCCATTCCTGTATGCGCTTGTCGCTGCTGTTGGTTTCTTTACAGTGATAACATCTGATCTCTTCAGGGACTTAAATGACTGGTTGAAGCTGGTGCCACTTCCAGTGGGATTGAGGGATAAACTATTGATTTGGGCGTTTCTAATGTTTTTGGTATGCTACTCATGGGAAAGACTGTTGAGGTGGGCATTCCCAGGCAAGATCCCAGCTTGGAAGAAGCGACAAAGAGTTGCTGTATCTAATTTAGAGAAGAAACAGGTCTAA 3573 0.447 MSSFHVGGKVVDRVDLLRKKQLPWRVDVWPFAVLYGTWLATILPSLDFVDAAIVLGALVSLHILAWLFTGWSVDFKCFAHYSKVKNIHQADSCKITPAKFSGSKEVVPLRFRKIPAGSSSAVDQEEIYFEFRKQCFVFSKENGTFCKLTYPTKETIGCYLKSSGHGSEAKVLAATEKWGRNVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDSQILMVHRCGKWVKLSGTDLLPGDVISIGRSSGQNGEEKSVPADMLLLAGSAIVNEAILTGESTPQWKVSIMGRGIEEKLSIRRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLIKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLTGTTDLEFDMSRVPARTLEILASCHALVFVENKLVGDPLEKAALKGIDWSYKSDEKAVPKKGSGQPVQIVQRYHFASHLKRMAVIVRIQEEFFAFVKGAPEIIQDRLIDVPLSYVETYKKYTRQGSRVLALAYKSLSDMTVSEARSLDRDVVENGLTFAGFVVFNCPIRSDSATVLSELKGSSHDLVMITGDQALTACHVASQVHIISKPTLILGPASNGAGYKWMSPDETENIPFSEKEVESLSETHDLCVGGDCFDMLQQTSAHLRVIPYVKVFARVAPEQKELIMTTFKTVGRVTLMCGDGTNDVGALKQAHVGVALLNAMPPAQSGNSSSDSATDEGSKSGKPKKSKSTLEASGKTANLIGEGTSKAKAASKSDSASHSSVNRHQAAADMQRQKLKKMLDELNEEDGRAPVVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPNIFCAYVFLSLLGQFSIHLLFLISSVKEAEKYMPDECIEPDASFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSIPENKPFLYALVAAVGFFTVITSDLFRDLNDWLKLVPLPVGLRDKLLIWAFLMFLVCYSWERLLRWAFPGKIPAWKKRQRVAVSNLEKKQV* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0045 1190 Pfam E1-E2 ATPase 258 468 - -
Dod09g0045 1190 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 403 507 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod09g0045 1190 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Dod09g0045 1190 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Dod09g0045 1190 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Dod09g0045 1190 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Dod09g0045 1190 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166
Dod09g0045 1190 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Dod09g0045 1190 SFLD C1.7: P-type atpase like 469 954 - -
Dod09g0045 1190 MobiDBLite consensus disorder prediction 833 904 - -
Dod09g0045 1190 Gene3D - 226 388 - -
Dod09g0045 1190 Pfam haloacid dehalogenase-like hydrolase 485 713 - -
Dod09g0045 1190 Coils Coil 893 917 - -
Dod09g0045 1190 SUPERFAMILY HAD-like 483 836 IPR036412 -
Dod09g0045 1190 MobiDBLite consensus disorder prediction 880 899 - -
Dod09g0045 1190 MobiDBLite consensus disorder prediction 833 848 - -
Dod09g0045 1190 CDD P-type_ATPase_cation 170 1106 - -
Dod09g0045 1190 Gene3D - 669 846 IPR023214 -
Dod09g0045 1190 SFLD p-type atpase 469 954 IPR044492 -
Dod09g0045 1190 Gene3D - 483 668 IPR023299 GO:0000166
Dod09g0045 1190 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1168 IPR023298 -
Dod09g0045 1190 PANTHER CATION-TRANSPORTING ATPASE 1 1183 - -
Dod09g0045 1190 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 42 1148 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Dod09g0045 1190 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 1183 - -
Dod09g0045 1190 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Dod09g0045 1190 SUPERFAMILY Calcium ATPase, transduction domain A 255 387 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0045 Dod-Chr9 763024 775405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0045 1 1189 Primary Pumps ATPases AT5G23630 78.290 0.0 1918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0045 K14950 - gmx:100789385 2164.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0045 09 763024 775405 Dod09g0045 09 763024 775405 ECH