Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0036 ATGCCTCTTTTGAGGAGAAAGCCTTTTGCCTTGGCTGAGCCACCTAAGGATTTGGAGCCGAGTGAGACTGTTTACCAGATTCGTTTTACAAAAGAAATATTTCGAGATTATCATGATTATTTGAGCCATATCAATCTATACCGTCAGAGGATTTGGATGTGCAAGGTCACTGGAAAAACTTGCTTGACTTATGAAGGGGCTCTGGTGTCAGAAAAACATGCCACTGAGAAAGTTCAACAGTTTCCTAAAGAATTAATGGCACCTGCTCTAAGGATTATTCAATTCAGCATGCTCCCATTGAAGGATCTTGCCGATTCTATTGCCGAAAAATTGCAGGAGCGGTTGTTTGTGGGTGCTGAACTGTATGGAAGAAGGAATGATGGAGAACATCCATGCAAAATATTAAAAGTCATGCAGGAAGGGGTTGACAAGTTCAGTTATGAGGTAGCTTGGCTTGACAAAAACAAGAATATAATTGGAAGATCAGAAGTCAGCTCTGAAGATTTGGTACAGAAGAAGCAACCTTTTAGTAGAAATATGTTGAAGTCTTTCATCCGAGAATCTACATATCGGAATGCTCCTTGGGTGTTACATGATGAACTGGCACAAAATTATGGAATCCTGGCTGACATTCCAGAAGAGTTAAGAGAGAGGGTTTTCTTCAGCAATGGACTACTTTTAATCTGCTCCAAGAAAAGAAAAAACGAGGAATCAAAGGGAAGTCCTGAAAACTGTAAAAGGAAGAAGTCAGATGGGTTGAAATTGGATAGTTCAACCCAAGAGAAAGAAAATGACCATGATGAGGAACAGCCAATCAAATACCCAATTGACGATCTATTGGTGAAGCCTAGTGCAGATGATTCTGTTTTTGCTGAACGTCCTTCTCCAACAAGAGATTTTAATGTTCCACTGTATTGTGTTGGGGATCTCTTCATGGTTTGGGATTTTTTCATGTCTTTTGGTAAACTATTACGGTTGTCGCCCTACTCTCTTGAAGATTTTGAAAATGCACTCTGCCACAAGGATAGCAATGTGGTTCTCCTTGTGGAATCTCATGCTGTACTCTTTCGGCTGCTCATCAAAGACAATGGTGAATACACTTCAGCTGTACAGAAAAGAAGGCGAAGGTCTAAGATTACAATGATTAATTGGACAGAGTACTTATGCAATTTTCTAGAAATGATCAATATTCCTGGACTACGGCACTATGAAGCAACCATAAAACGGGGACATTATGGCCGTGTATATGCCGGTGCTAAATTAGAAATCTTTCGTGAATTGGTCAATCATGTCCTTGAAACTGCTACTGTCAGGGAAAAGTTGGATGAGTTTATTGAGCAGCGGCAGGCACTCACTGCCTCTAGAAGGGGAGAAGCACTGGAAGCTGCTAGGAAGAGAAGAGAAGAAAAAGAGCAGGTGAAAGCCGACTCTGAAAACAATGGAGGTGTGGATGGTCATCAACTAAACAGTGTTGCTTGTGTCTCAACAAACAATAATCACGGGATACAGAATGGCCAAATAGATGCATTGGATAGAAGCAGTGTGATCAAGCATTCAAATCCTGCTTCAAAAATGACATCGAAGAAGTTGAATTCAGAGAAGAAAGGTCCAGAAGAAAATGGAAATGAATTGTCCAGAAAGGAATTACAGCAACAATTGAATGGTGATAAGGATCCATTAGAGAAGAGAAGTAAAGAAGAGAGGAGAGAGTATTTTGAACGGGAGATGGAGAAACGGCTTATTCGTACAAGTTCCCTAGGCAAGGACAGATATTATAATAGGTATTGGTGGTTCCACCACGATGGGAGGATATTTGTTGAAAGTTCTGACTCCAAGGAGTGGGGATACTACAGCAGCAAGGAAGAGCTTGATGCCTTGATGGGTTCGCTGAATTGCAAGGGTGAGAGGGAAAGAGCTCTGCAAAAGCAACTGGAAAAATATTATAGTAGAATATGCCCAGAACTCCAGAAAAGATCAAAGGATTTGACACCAAAAATGTCAATGGATGATACTGTGGTCCGAAGGTCAAGTCGTGTTCGAGCTCTGCCCGGGGAAAGTCCTGCCAATGCTTTCCTCAGATATGTTAACAAGTGGAAAGAAGAGTAA 2106 0.4117 MPLLRRKPFALAEPPKDLEPSETVYQIRFTKEIFRDYHDYLSHINLYRQRIWMCKVTGKTCLTYEGALVSEKHATEKVQQFPKELMAPALRIIQFSMLPLKDLADSIAEKLQERLFVGAELYGRRNDGEHPCKILKVMQEGVDKFSYEVAWLDKNKNIIGRSEVSSEDLVQKKQPFSRNMLKSFIRESTYRNAPWVLHDELAQNYGILADIPEELRERVFFSNGLLLICSKKRKNEESKGSPENCKRKKSDGLKLDSSTQEKENDHDEEQPIKYPIDDLLVKPSADDSVFAERPSPTRDFNVPLYCVGDLFMVWDFFMSFGKLLRLSPYSLEDFENALCHKDSNVVLLVESHAVLFRLLIKDNGEYTSAVQKRRRRSKITMINWTEYLCNFLEMINIPGLRHYEATIKRGHYGRVYAGAKLEIFRELVNHVLETATVREKLDEFIEQRQALTASRRGEALEAARKRREEKEQVKADSENNGGVDGHQLNSVACVSTNNNHGIQNGQIDALDRSSVIKHSNPASKMTSKKLNSEKKGPEENGNELSRKELQQQLNGDKDPLEKRSKEERREYFEREMEKRLIRTSSLGKDRYYNRYWWFHHDGRIFVESSDSKEWGYYSSKEELDALMGSLNCKGERERALQKQLEKYYSRICPELQKRSKDLTPKMSMDDTVVRRSSRVRALPGESPANAFLRYVNKWKEE* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0036 701 ProSiteProfiles DDT domain profile. 304 365 IPR018501 -
Dod09g0036 701 MobiDBLite consensus disorder prediction 518 566 - -
Dod09g0036 701 MobiDBLite consensus disorder prediction 458 477 - -
Dod09g0036 701 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 23 120 IPR013136 -
Dod09g0036 701 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 699 - -
Dod09g0036 701 MobiDBLite consensus disorder prediction 528 566 - -
Dod09g0036 701 Pfam DDT domain 306 362 IPR018501 -
Dod09g0036 701 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 581 647 IPR028941 -
Dod09g0036 701 ProSiteProfiles WAC domain profile. 22 129 IPR013136 -
Dod09g0036 701 Coils Coil 460 480 - -
Dod09g0036 701 MobiDBLite consensus disorder prediction 236 269 - -
Dod09g0036 701 MobiDBLite consensus disorder prediction 455 488 - -
Dod09g0036 701 SMART testlast3 304 365 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0036 Dod-Chr9 604167 615686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0036 410 646 Homeobox Transcription Factor Family AT5G44180 27.200 1.19e-06 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Dod09g0036 WAC_Acf1_DNA_bd 4.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0036 - - gmx:100789956 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2598 04 49891262 49898118 Dod09g0036 09 604167 615686 PCT