Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0033 ATGGCCGCAGAAATTTGTCGCGGGTCTCTTCTCTTATCCGTTAAAACTCAACTTCACCACGCGCCACCAACAACGACCGCCACCACCACCAGATTCCACTCATCACCATCATCATCATCGCATTCACCCTATTCCAAACCTTCCTCCCTCTCTCGCTCTCTCAATCTCAATGCTCCCTCCTTCTCCTCCGTTCGTCGCGGTGGCTCTTCCGCCGTCTCCTGCCAGGCCAGCACTCTCTCCGACGTCGAGTCCGCCGCCAGAGCTGGCCAGGACCGTCTCTCGAAGGTGCCGGTTTCGAATATAAGGAACTTCTGCATCATTGCTCATATTGACCACGGGAAATCCACTTTAGCAGATAAATTGCTTCAGGTCACTGGCACTGTCCATCAGCGAGAGATGAAGGAACAGTTTCTCGATAACATGGACCTCGAGAGAGAACGAGGGATCACTATTAAGCTCCAGGCAGCTCGAATGCGTTATGTGTTTGAGAACAAACCATATTGCTTAAATCTGATAGATACTCCAGGACATGTTGACTTCTCGTATGAGGTTTCTCGGTCACTTGCTGCATGTGAGGGTGCTCTTCTCGTGGTAGATGCTTCTCAGGGAGTTGAAGCACAAACACTAGCTAATGTTTATTTGGCTTTGGAAAACAACCTAGAAATTATCCCTGTTTTGAACAAAATTGATCTTCCAGGTGCAGAACCAGATCGAGTTATTAAGGAGATTGAAGAGGTTGTAGGTTTGGATTGTAGCAATGCAATTCTCTGCTCTGCAAAGGAAGGAGTCGGTATAATTGATATCCTCAATGCAATTGTTGCAAGAATCCCCCCACCTGCTGATACATCTAAAAGGCCATTGAGGGCTTTGATATTTGATAGTTACTATGATCCATATAGAGGTGTTATCGTATACTTCAGAGTTGTGGATGGGGCTATAAAGAAAGGTGACAGAGTTTATTTTATGGCTAGTGGGAAGGATTATTTTGCTGATGAAATTGGAGTTTTGTCTCCCAATCAACAAGAAGTTGAAGAATTGTATGCTGGTGAGGTGGGCTACCTATCTGCATCAATAAGAACAGTAGCTGATGCCAGAGTGGGCGACACAATTACTCACTATGGTAGAAAGGCTGATACTTCACTCCCTGGATACGAGGAAGCAACTCCTATGGTGTTCTGTGGCCTGTTTCCCGTTGATGCTGATCAATTTGCTGAGCTACGTGATGCTCTTGAGAAGTTACAACTTAACGATGCTGCACTGAAGTTTGAACCCGAGACTTCAAGTGCCATGGGATTTGGCTTTAGATGTGGGTTTCTCGGTCTTCTCCACATGGAAATTGTTCAGGAAAGACTTGAGAGAGAATACAATTTGAGCCTGATAACTACTGCTCCAAGTGTTGTTTACAGAGTGAACTGTGTAAATGGTGATACTGTTGAATGCTCAAATCCATCTTTACTTCCTGAACCTGGAAAAAGGAAATCAATTGAGGAGCCATTTGTTAAGATTGAGATGCTTACACCGAAGGATTACATTGGGACACTTATGGAACTGGGACAAGAAAGGAGAGGGAAGTTCAAAGAAATGAAATTTATCACTGAAAATAGAGCATCAATCATCTATGAACTACCACTCGCAGAGATGGTTGGTGATTTCTTTGACCAGTTAAAGTCAAGAAGTAAGGGTTATGCGAGTATGGAGTATACTTTTATCGGGTACAATGAAAGTGATTTAATTAAACTTGACATACTGATAAATGGTGATTGTGTGGAGCCATTGGCTACCATTGTGCATAAAGATAAGGCATATTCTGTGGGAAGGGCTTTGACTCTAAAGCTGAAGGAGCTCATACCACGGCAAATGTTTAAAGTGCCAATTCAAGCATGCATAGGGTCAAAAGTGATTGCTAGTGAAGCTTTATCTGCAATAAGGAAGGATGTATTGGCCAAGTGCTACGGTGGGGACATTTCGAGAAAAAAGAAGTTGCTTAAGAAACAGGCTGAAGGCAAGAAAAGGATGAAGTCTATTGGTAAAGTTGACGTGCCTCAAGAAGCCTTCATGGCGGTTTTGAAACTTGAAAAGGAGGTAATATGA 2091 0.4366 MAAEICRGSLLLSVKTQLHHAPPTTTATTTRFHSSPSSSSHSPYSKPSSLSRSLNLNAPSFSSVRRGGSSAVSCQASTLSDVESAARAGQDRLSKVPVSNIRNFCIIAHIDHGKSTLADKLLQVTGTVHQREMKEQFLDNMDLERERGITIKLQAARMRYVFENKPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRVIKEIEEVVGLDCSNAILCSAKEGVGIIDILNAIVARIPPPADTSKRPLRALIFDSYYDPYRGVIVYFRVVDGAIKKGDRVYFMASGKDYFADEIGVLSPNQQEVEELYAGEVGYLSASIRTVADARVGDTITHYGRKADTSLPGYEEATPMVFCGLFPVDADQFAELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRKSIEEPFVKIEMLTPKDYIGTLMELGQERRGKFKEMKFITENRASIIYELPLAEMVGDFFDQLKSRSKGYASMEYTFIGYNESDLIKLDILINGDCVEPLATIVHKDKAYSVGRALTLKLKELIPRQMFKVPIQACIGSKVIASEALSAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0033 696 SUPERFAMILY Translation proteins 262 384 IPR009000 -
Dod09g0033 696 MobiDBLite consensus disorder prediction 20 51 - -
Dod09g0033 696 Gene3D - 464 575 - -
Dod09g0033 696 PANTHER TRANSLATION FACTOR GUF1-RELATED 89 690 IPR006297 GO:0005525
Dod09g0033 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 298 IPR027417 -
Dod09g0033 696 Pfam GTP-binding protein LepA C-terminus 584 690 IPR013842 -
Dod09g0033 696 Gene3D - 576 650 IPR038363 -
Dod09g0033 696 TIGRFAM lepA: elongation factor 4 100 691 IPR006297 GO:0005525
Dod09g0033 696 SMART EFG_C_a 494 582 IPR000640 -
Dod09g0033 696 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 139 154 IPR031157 -
Dod09g0033 696 PRINTS GTP-binding elongation factor signature 222 231 IPR000795 GO:0003924|GO:0005525
Dod09g0033 696 PRINTS GTP-binding elongation factor signature 186 197 IPR000795 GO:0003924|GO:0005525
Dod09g0033 696 PRINTS GTP-binding elongation factor signature 103 116 IPR000795 GO:0003924|GO:0005525
Dod09g0033 696 PRINTS GTP-binding elongation factor signature 146 154 IPR000795 GO:0003924|GO:0005525
Dod09g0033 696 PRINTS GTP-binding elongation factor signature 170 180 IPR000795 GO:0003924|GO:0005525
Dod09g0033 696 SUPERFAMILY EF-G C-terminal domain-like 495 589 IPR035647 -
Dod09g0033 696 Gene3D Translation factors 282 381 - -
Dod09g0033 696 Hamap Elongation factor 4 [lepA]. 96 694 IPR006297 GO:0005525
Dod09g0033 696 Pfam Elongation factor G C-terminus 495 581 IPR000640 -
Dod09g0033 696 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 99 280 IPR000795 GO:0003924|GO:0005525
Dod09g0033 696 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 89 690 - -
Dod09g0033 696 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 93 693 IPR027518 -
Dod09g0033 696 CDD LepA 102 279 - -
Dod09g0033 696 CDD lepA_C 497 576 IPR035654 -
Dod09g0033 696 SUPERFAMILY EF-G C-terminal domain-like 388 466 IPR035647 -
Dod09g0033 696 Pfam Elongation factor Tu domain 2 301 371 IPR004161 GO:0005525
Dod09g0033 696 TIGRFAM small_GTP: small GTP-binding protein domain 102 270 IPR005225 GO:0005525
Dod09g0033 696 Pfam Elongation factor Tu GTP binding domain 100 277 IPR000795 GO:0003924|GO:0005525
Dod09g0033 696 CDD EF4_II 287 372 - -
Dod09g0033 696 Gene3D Elongation Factor G (Translational Gtpase), domain 3 382 463 - -
Dod09g0033 696 CDD EF4_III 389 464 - -
Dod09g0033 696 Gene3D - 98 281 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0033 Dod-Chr9 554466 569936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0033 101 334 Eukaryotic Initiation Factors Gene Family AT3G22980 34.818 1.22e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0033 K21594 - gmx:100784073 1166.76