Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0032 ATGGGGAGAAGCACTAGCAGTTCAAAGGAGCGCTTGAACCGAGGTGCTTGGACAGCTCAAGAAGACAAAATCCTAAGAGACTATATCGCTGTCCATGGCGAAGGAAAGTGGAATAAACTCCCCCAAAGAGCAGGCTTGAAACGATGTGGGAAAAGTTGCAGACTTCGGTGGCTGAATTACTTGAGACCAAACATTAAGAGAGGCAACATATCACAAGAGGAAGAAGATCTGATCATCAGGCTTCACAAGCTGCTGGGAAACAGATGGTCTCTAATAGCAGGGAGGCTTCCAGGACGAACAGACAATGAAATAAAGAATTATTGGAACACCAATTTAGCTAAAAGAGTTATAAGAGATGGCCACAACAACACATCGATTGCCACTGTTAGTACTACTGATCAAGAGAAAACCAATGTGTTCCATGCAAAGGCATCCAAGTGCTCAAAACGATTGTTCATAGACCATCCACTCCCTCATTATTCATCAATGCAATTGCAGAGAGAGTTTACTAACGAGATGGAAATGGACGGCAATAATGAGCTCTTGTCGTTTCCCTGCAGTGAATTCGGAGGAGGAAAAGAGCTCTCATCAACGGATCATTTGTTGTTCGATTATTGTGATGAGGGCATTGGGGAAGTTTGCCTTTCCGATCTTCTGAATTTGGATTTCTCAGACACATGCGATTTCGGTTACAACAATAATAATATTAATAATAATAGCAGTGATGAGGACCTGTTCGCTCTTTGGGACAGACCTATACAAAGCAACCTTCGTGATGAAACAAATGTAGCAAATAATGTTCATTCTTCCACTTCGCTAGCTCCTTTGAGTTCCCTTATTGATGATAACGACCTCTCTTTCCTTTAA 867 0.421 MGRSTSSSKERLNRGAWTAQEDKILRDYIAVHGEGKWNKLPQRAGLKRCGKSCRLRWLNYLRPNIKRGNISQEEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLAKRVIRDGHNNTSIATVSTTDQEKTNVFHAKASKCSKRLFIDHPLPHYSSMQLQREFTNEMEMDGNNELLSFPCSEFGGGKELSSTDHLLFDYCDEGIGEVCLSDLLNLDFSDTCDFGYNNNNINNNSSDEDLFALWDRPIQSNLRDETNVANNVHSSTSLAPLSSLIDDNDLSFL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0032 288 SMART sant 66 114 IPR001005 -
Dod09g0032 288 SMART sant 13 63 IPR001005 -
Dod09g0032 288 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dod09g0032 288 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Dod09g0032 288 Gene3D - 71 144 - -
Dod09g0032 288 CDD SANT 16 61 IPR001005 -
Dod09g0032 288 Gene3D - 5 67 - -
Dod09g0032 288 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dod09g0032 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Dod09g0032 288 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Dod09g0032 288 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 255 - -
Dod09g0032 288 CDD SANT 71 112 IPR001005 -
Dod09g0032 288 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dod09g0032 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Dod09g0032 288 PANTHER MYB TRANSCRIPTION FACTOR 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0032 Dod-Chr9 539461 541213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0032 1 185 MYB Transcription Factor Family AT4G38620 49.730 1.73e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod09g0032 Myb_DNA-binding 7.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0032 K09422 - gmx:100781908 274.633