Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0022 ATGGTGTTCTGCAACACCTGCATGCCTCCAACTAAGACTCGTGCAGGTGAATTTTTCTTGGAGGTCAAAGGGGCTTACATGTTTCAACCAAAGTTTAGATGGGCTGCTCTCAAAATATTGGCAAGTTGGCTGATATTACTAAGTAGTGTCTTGAGACTCAGTTATGCAATTACAGAACCTGATGTGGAAGGTGAAGCATTGGTTGAATTTTTGAGGGCCCTCAATGATTCCAATAATCAAATTAGAGACTGGAATAGTTATTTTGTGAGCCCGTGCTACAGTTGGTCTAATGTCACTTGCAGTAACACACATGTTATCTCTTTGAGCCTGGGATCAAATGGATTTTCTGGAACACTTTCTCCCTCAATTGTCAAATTGAAATACTTGGTTAGCCTGGAATTGCAGAACAACAATCTTGCAGGCCCCTTACCTGACTACATTGCCAACTTGACACACCTAGAATATCTAAATCTTGCTAACAATAATTTCAAAGGTTCTATACCAGCTACATGGGGTCAACTTTCCAATCTAAAGCATCTGGATCTTTCGTCTAATGGTCTAAGTGGAAGTATCCCATCGCATCTCTTTTCAGTTCCAATATTCAATTTTTCGGATACGCTTCTTCATTGTGGCTCTAGCTTGGAGCAGCCTTGTGTTTCTAGTTCTGCACGTCCTGGTTCAACTAACAAATCAAAACTAGCAGTGGCTGTTAGTTTTGCAAGTTGTGGTTCATTTGCACTTGTGTGTCTCGGGGCTATCCTTGCATATAGATATCATCGCATGCACAGACATAAAAGTGATGTCTTTTTTGATGTTTCAGGTGAAGATGAGAGCCAAATTTCCTTTTGGCAATTGAGAAGATTTTCTTGGCGTGAACTCCAACTTGCAACTAAAAATTTCAGTGAAAGCAGTGTAATTGGCCAGGGAGGCTTTGGAAAAGTTTATAAAGGAGTACTCACAGATGGTACAAAAGTAGCTGTGAAACGCCTTGCTGATTATCAGGCTCCTGGTGGAGAGGCTGCATTCCAAAGAGAAGTTCAGCTTATAAGTGTTGCAGTTCACAAGAATCTCCTAAGATTAATTGGGTACTGCACAACCTCAACTGAAAGAATCCTCGTATATCCCTTCATGCAAAATCGAAGTGTAGCACATCAATTGAGAGATTTGAAACCTGATGAGAAAGGTTTAGACTGGCCAATACGGAAACGCGTGGCTTTCGGTACAGCTTATGGATTGGAGTATCTACATAATCAGTGCAATCCTAAGATCATACACCGTGATTTGAAGGCTGCAAATATCCTACTAGATGATAACTTTGAAGCTGTTCTAGGAGACTTCGGGCTAGCCAAGCTGGTTGATACAAGGGTGACTCATGTTACAACTCAAGTGAGAGGCACAATGGGTCATATAGCCCCAGAATATTTGTCCACTGGAAAATCATCAGAAAAGACTGATGTGTTTGGATATGGTATAACACTTCTTGAGCTAGTCACTGGTCAACGTGCCGTTGACTTCTTTCGGCTTCAAGAGGAGGAGGATGTTCTTCTTCTTGATCATATAAAAACGCTATTGAGGGAAAACAGGCTGAAGGACATTGTGGATAGAAACTTGGAAACCTATGAGGCCAAGGATGTTGAGACCATCATTCATGTTGCATTGCTTTGCACCGAAAGCTTGCCAGAGGAGCGTCCAAGCATGTCAGAGATAGTGAAGTTGCTGCAGGGAGTGGGATTATCAGAGAGATGGGCAGAATGGGAGCAACAAGAAGAGGTTAGTAATCAACTCATGTCTCACCAATTTGTTTGGACTGGTGAATCCACCCATGATGACCAAGAGGCTATAAAGCTTTCCAGAGCAAGATGA 1863 0.4198 MVFCNTCMPPTKTRAGEFFLEVKGAYMFQPKFRWAALKILASWLILLSSVLRLSYAITEPDVEGEALVEFLRALNDSNNQIRDWNSYFVSPCYSWSNVTCSNTHVISLSLGSNGFSGTLSPSIVKLKYLVSLELQNNNLAGPLPDYIANLTHLEYLNLANNNFKGSIPATWGQLSNLKHLDLSSNGLSGSIPSHLFSVPIFNFSDTLLHCGSSLEQPCVSSSARPGSTNKSKLAVAVSFASCGSFALVCLGAILAYRYHRMHRHKSDVFFDVSGEDESQISFWQLRRFSWRELQLATKNFSESSVIGQGGFGKVYKGVLTDGTKVAVKRLADYQAPGGEAAFQREVQLISVAVHKNLLRLIGYCTTSTERILVYPFMQNRSVAHQLRDLKPDEKGLDWPIRKRVAFGTAYGLEYLHNQCNPKIIHRDLKAANILLDDNFEAVLGDFGLAKLVDTRVTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAVDFFRLQEEEDVLLLDHIKTLLRENRLKDIVDRNLETYEAKDVETIIHVALLCTESLPEERPSMSEIVKLLQGVGLSERWAEWEQQEEVSNQLMSHQFVWTGESTHDDQEAIKLSRAR* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0022 620 PANTHER LRR RECEPTOR-LIKE KINASE 38 620 - -
Dod09g0022 620 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 38 620 - -
Dod09g0022 620 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Dod09g0022 620 Gene3D Ribonuclease Inhibitor 60 220 IPR032675 -
Dod09g0022 620 Pfam Leucine rich repeat N-terminal domain 62 101 IPR013210 -
Dod09g0022 620 ProSiteProfiles Leucine-rich repeat profile. 176 198 IPR001611 GO:0005515
Dod09g0022 620 SMART LRR_typ_2 150 173 IPR003591 -
Dod09g0022 620 SMART LRR_typ_2 174 198 IPR003591 -
Dod09g0022 620 SUPERFAMILY Protein kinase-like (PK-like) 278 573 IPR011009 -
Dod09g0022 620 SUPERFAMILY L domain-like 63 198 - -
Dod09g0022 620 SMART serkin_6 300 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0022 620 Gene3D Transferase(Phosphotransferase) domain 1 377 593 - -
Dod09g0022 620 Pfam Protein kinase domain 301 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g0022 620 Pfam Leucine rich repeat 129 187 IPR001611 GO:0005515
Dod09g0022 620 Gene3D Phosphorylase Kinase; domain 1 269 376 - -
Dod09g0022 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Dod09g0022 620 ProSiteProfiles Protein kinase domain profile. 300 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0022 Dod-Chr9 401755 407390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0022 44 615 Receptor kinase-like Gene Family AT5G65240 53.554 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dod09g0022 Pkinase 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0022 - - adu:107463312 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0022 09 401755 407390 Dod09g0022 09 401755 407390 ECH