Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2328 ATGCATGGTTTCAGAGCACGGGTTGCTCTGCGCTCAATTTGTAAATCAAAGTGGCATCACCACCATGGAGGTGAAACCCTCACTTGGCAACTGGAGTTCGCTCGAAATCTCTCCACCACCACAAGAGGTCCCGATTTTACAGAACCTGTTACAGGATTGCCTACACGGTCTATGCAAATGCAAATTGTTGAGGCACTCTGCTTGGGTGACAGAAGAAAAGCTTCTGACTTACTTTTGGATTTTGGTCGCAAAAGCCACTCATTAATGGCTGATGATTTTCTTGATATTTTTAAGCACTGTGCACAGTCTTCTGATCCATTGTTTGCTATGGAGATTTGGAGATTAATGGAGGCAAAAGACATTAGCCTGAGTAATATGTGCTTCTTTCTTATGACACGGGCTCTTTGTGAAGGGGGTTACTTTGAAGAGGCCTTTAATATGATGGATTTTCTTGGAGAAAATCAACGCCTCTATCCAGTTCTCCCTTTGTACAATAGTTTCTTAAGATTCTGCACCAAGAAACAGAGTATAATTCATGCAAGCAAATGTTTGGACTTGATGGAAAAGCAGATGGTAGGAAAGAATGAAGTCACATATACGGAGCTCCTCAAGCTTGCAGTTTTGGAGAAAAACTTGCCTGCAGTCTATCTAATCTGGGAGGATTATATTAAACACTACAGCCTGAGCATCATTCCTCTGCGCAAATTCATTTGGTCATTTACAAGGTTGGGAGATTTAAAATCTGCATATAAAACACTACAACAAATGGTGTCATTAGCCACCAAGGGAAACATTTCTATTGCTAGAACAGCTGATGGGAAGTTGTATTCTACTAGATTGGACATCCCTGTCCCTTCAAATAGAGAGTTAGGCTCAACAATATTGGACTTAAAGGAGAACAAACAACTGGGTTCTTGGATATGCCCTCCTTTTGAGTATTTTCCAGATGGTATTTATGCAAGTATAGAGCAGCAAATTATTCTTATGGGAAATAAAGAAGCTAATAGTGCTGAACTAGATGGGCTGGATGGACCACAACACTCATTGCATATCAAGGTTTTGAGGTGGTCCTTTAATGATGTTATACATGGGTGTGCACAACATAGAAATTCTGAGCTTGCAGGGAAGCTTATATTACAGATGCAAAATCTTGGTTTGCAGCCATCCAGCCATACATATGATGGCTTTGTTAGAGCCATTGTTTCTGAAAGAAGTTATAGGGATGGCATGGAACTGTTAAAAAAAATGCAGCAGAATAATTTGAAGCCATATGATTCAACTCTAGCAGCACTTTCAGTCAGTTGCAGCAAGGCACTTCAACTGGATTTAGCTGAGGCTTTGCTGAATCAAATTGCATTATGTCTATATCTGCATCCTTATAATGCTTTGCTGGCAGCATGTGATGCAATGAATCAACCTGAACGTGCTGTGCGAGTGCTTGCCAAGATGAAGCAGATGAAACTTATACCTGATATCAGGACATACGAGCTTTTATTTTCATTGTTTGGAATTGTAAATGCCCCGTATGAAGATGGTAACATGCTGTCACAGGCGGATGCTGCTAAAAGAATTAATGCTATAGAAAGGGATATGGCAAAAAATGGCATTCAGCACAGTTGTATTTCAATGAAAAACTTGTTGAAAGCTCTCGGAGAAGAAGGGATGATAAGAGAGTTGGTCCAGTATTTATGTGTGGCAGAGAATCTTTTCTTTTACAGAAACCCTTCTTTGGGAACAGATATGTACAACACAGTCTTGCATTATCTTGTTGAAGCCCAAGAAAGTCACATGGCAATTGAAATTTTTAAGAAAATGAAGAAATTTGGCTGCCACACTGATTCTGCAACATACAATATAATGATTGACTGTTGTAGCATCCTAAGATGCTACAAATCTGCTTCTTTGCTGGTTGCAATGATGATACGGGAAGGTTTTTGTCCAGTGACTTGCACATATACTGCTCTCATCAAGGTTCTTCCTGTTAAATCTCCGATAGTGCAGTCCAAATTATCATCAATTTAA 2022 0.3976 MHGFRARVALRSICKSKWHHHHGGETLTWQLEFARNLSTTTRGPDFTEPVTGLPTRSMQMQIVEALCLGDRRKASDLLLDFGRKSHSLMADDFLDIFKHCAQSSDPLFAMEIWRLMEAKDISLSNMCFFLMTRALCEGGYFEEAFNMMDFLGENQRLYPVLPLYNSFLRFCTKKQSIIHASKCLDLMEKQMVGKNEVTYTELLKLAVLEKNLPAVYLIWEDYIKHYSLSIIPLRKFIWSFTRLGDLKSAYKTLQQMVSLATKGNISIARTADGKLYSTRLDIPVPSNRELGSTILDLKENKQLGSWICPPFEYFPDGIYASIEQQIILMGNKEANSAELDGLDGPQHSLHIKVLRWSFNDVIHGCAQHRNSELAGKLILQMQNLGLQPSSHTYDGFVRAIVSERSYRDGMELLKKMQQNNLKPYDSTLAALSVSCSKALQLDLAEALLNQIALCLYLHPYNALLAACDAMNQPERAVRVLAKMKQMKLIPDIRTYELLFSLFGIVNAPYEDGNMLSQADAAKRINAIERDMAKNGIQHSCISMKNLLKALGEEGMIRELVQYLCVAENLFFYRNPSLGTDMYNTVLHYLVEAQESHMAIEIFKKMKKFGCHTDSATYNIMIDCCSILRCYKSASLLVAMMIREGFCPVTCTYTALIKVLPVKSPIVQSKLSSI* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2328 673 Gene3D Tetratricopeptide repeat domain 574 665 IPR011990 GO:0005515
Dod08g2328 673 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 6 660 - -
Dod08g2328 673 Pfam PPR repeat family 581 624 IPR002885 -
Dod08g2328 673 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 389 423 IPR002885 -
Dod08g2328 673 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 456 490 IPR002885 -
Dod08g2328 673 Pfam Pentatricopeptide repeat domain 378 423 IPR002885 -
Dod08g2328 673 Pfam Pentatricopeptide repeat domain 460 503 IPR002885 -
Dod08g2328 673 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 578 612 IPR002885 -
Dod08g2328 673 TIGRFAM PPR: pentatricopeptide repeat domain 616 647 IPR002885 -
Dod08g2328 673 TIGRFAM PPR: pentatricopeptide repeat domain 581 613 IPR002885 -
Dod08g2328 673 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 613 647 IPR002885 -
Dod08g2328 673 Gene3D Tetratricopeptide repeat domain 56 274 IPR011990 GO:0005515
Dod08g2328 673 Gene3D Tetratricopeptide repeat domain 347 456 IPR011990 GO:0005515
Dod08g2328 673 Gene3D Tetratricopeptide repeat domain 457 573 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2328 347 657 Glycosyltransferase AT1G05670 23.885 9.11e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2328 - - adu:107495722 890.182