Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2325 ATGGAGCACACAAGAGATAACAAGGTAATCGACCCAAGGAGTGGGTTCTGCAGCTCGAATTCAGTGTTCTACAGCAAGAGGAAGACACTCCCACTCCCACAGAACCACTCCTTGGACGTCACCACCTTCATCTCCTCCCACGCCCACCACGGCAAAATCGCCTTCGTCGACGCCGCCACCGGCCGCCACTTCACCTTCCACCAGCTCTGGCTCGCCGTGGACGCCGTCGCTGCCTCCCTCTCCGACATCGGCATCCGGAAAGGCAACGTCGTGCTCCTCCTCTCCCCAAACTCCATCTACTTCCCCGTGGTGTGCCTCGCCGCCATGTCCCTCGGCGCCATCATCACCACCACCAACCCCCTCAACACCGCCGCCGAAATCCGCAAGCAGGTCAACGACTCCAAGCCCGTCATCGCATTCACCACCCCTCCCCTCGCTCCCAAAATCGCCACAGCCGCGCCCAACCTCCCAATCATCCTCATGGAACCCGAAGACCACCCCAACAGCAACAGCATTTCGTCGGCCAAAATCCTCACCACGCTCACCCGCATGATGGAGAAAGAGCCCGGGTCAACCCGAGTCAGGGACCGAGTCGACCAGGACGACACGGCCACCCTTCTCTACTCCTCCGGCACGACGGGGCCCAGCAAGGGCGTGGTGTCCTCTCACCGGAACCTGATCTCGATGGTTCAGATCGTCCTTGGTCGTTTCACCATCGAGGAGGATCAGACCTTCATCTGCACCGTCCCAATGTTCCACATATACGGTCTGGCGGCGTTCGCGACGGGGCTTCCGGCGTCGGGCGCCACGGTCGTGGTGCTGTCGAAGTTCGAGATGCACGACATGCTGTCGGCGATCGAGAGGTTCCGTGCCACGTACCTGCCGCTGGTGCCGCCCATTCTGGTGGCGATGCTCAACAACGCCGACGCCATAAGCAGCAAGTACGATTTGAGCTCCCTGCATTCGGCGCTATCGGGTGGAGCTCCGCTGAGCAAGGAGGTGATAGAGGGGTTTGTGGAGAAGTACCCGAAGGTGACGATTCTTCAGGGTTACGGGTTGACGGAGTCCACCGGTGTTGGTGCATCGACGGATTCCCTGGAGGAGAGCCGCAGGTACGGCACGGCTGGGCTTTTGTCGCCGGGAATGGAGGCGAAGGTCGTTGACACTGACTCTGGGAAGGCGCTTCCGGTTAACCGAACTGGTGAGCTCTGGCTCAGGGGTCCCACCGTCATGAAAGGCTATTTCAGTAACGAGGAAGCAACCACATCTACCCTTGATTCAGAGGGATGGTTAAGAACGGGGGATGTTTGCTACATTGATAGTGATGGATTCATATTTATTGTCGATAGGTTGAAAGAGCTCATTAAATACAAGGGATATCAGGTCCCTCCAGCGGAACTAGAGGCCTTGTTGCTGACTCATCCTGCTATTTTAGATGCTGCTGTCATACCGTTTCCAGATAAGGAGGCTGGGCAGTATCCAATGGCATATGTGGTAAGGAAGGCTGGAAGTAGCATAGCAGAAAAGGAAGTTTTGGATTTTGTCGCAAAACAGGTGGCCCCATACAAAAGAATTCGAAGGGTGGCGTTTATATCTTCCATACCCAAAAATCCGTCTGGTAAAATCCTCAGGAAGGATCTAATCAAGCTTGCAACGTCTAAACTCTGA 1668 0.5641 MEHTRDNKVIDPRSGFCSSNSVFYSKRKTLPLPQNHSLDVTTFISSHAHHGKIAFVDAATGRHFTFHQLWLAVDAVAASLSDIGIRKGNVVLLLSPNSIYFPVVCLAAMSLGAIITTTNPLNTAAEIRKQVNDSKPVIAFTTPPLAPKIATAAPNLPIILMEPEDHPNSNSISSAKILTTLTRMMEKEPGSTRVRDRVDQDDTATLLYSSGTTGPSKGVVSSHRNLISMVQIVLGRFTIEEDQTFICTVPMFHIYGLAAFATGLPASGATVVVLSKFEMHDMLSAIERFRATYLPLVPPILVAMLNNADAISSKYDLSSLHSALSGGAPLSKEVIEGFVEKYPKVTILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPGMEAKVVDTDSGKALPVNRTGELWLRGPTVMKGYFSNEEATTSTLDSEGWLRTGDVCYIDSDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPFPDKEAGQYPMAYVVRKAGSSIAEKEVLDFVAKQVAPYKRIRRVAFISSIPKNPSGKILRKDLIKLATSKL* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2325 555 Gene3D - 453 554 IPR045851 -
Dod08g2325 555 PANTHER BNAA06G14440D PROTEIN 10 554 - -
Dod08g2325 555 ProSitePatterns Putative AMP-binding domain signature. 206 217 IPR020845 -
Dod08g2325 555 Gene3D - 20 452 IPR042099 -
Dod08g2325 555 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 554 - -
Dod08g2325 555 Pfam AMP-binding enzyme 48 457 IPR000873 -
Dod08g2325 555 Pfam AMP-binding enzyme C-terminal domain 466 541 IPR025110 -
Dod08g2325 555 CDD 4CL 32 547 - -
Dod08g2325 555 SUPERFAMILY Acetyl-CoA synthetase-like 47 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2325 Dod-Chr8 51299383 51303814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2325 1 555 Monolignol Biosynthesis Gene Families AT1G20500 63.327 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2325 K10526 - gmx:100811344 867.07