Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2310 ATGGGGCACTGCTTCACCAAAAGCAACAGCAGGAGCGATGATGATAGAGTTCCAATTTCTTATCAATCTGATTTTTCACCACCCCATCATCACCAGCAACTTCCAAAGAGAACCCCACACGTACAACAACCACCACCACAAGTACCACAACAACCTCCTCATCATCCATTCCATGCTTCAAAATCAGACCCTACTCCATCATCATCATCATCATCATCTTATAGTTCTGAAGCTGCATCGATAATCTTAGGCAAACCATATGTTGACATAAAGGCCCTTTACACCCTTGACAAGGAACTGGGCAGGGGCCAATCTGGTGTCACATATCTTTGCACTGAGAAGGCCACAGGGAGACAATATGCTTGCAAGTCCATTGCAAGGAGAAAGCTAACGAGAAAGAAGGAAATTGATGATGTGAAGAGGGAGATTATGATCCTTCAGCACCTATCGGGACAACCAAACATAGTTGAATTCAAGGGAGCTTATGAGGACAAGCAGCACGTGCATGTGGTGATGGAGCTGTGTAGGGGTGGTGAGCTCTTTGATAGGATCATTGCCAAGGGGGCTTACTCTGAGCGTGAGGCTGCTTCTATATTCAGGCAAATTGTGAATGTGGTTCATGTTTGCCATTTCATGGGGGTGATGCATAGGGACTTCAAACCAGAGAATTTCTTGATGGTTAGTAAGGATGGCAACTCACCCTTGAAAGTCACAGATTTTGGACTCTCTGTCTTCATTGAAGAAGGTAAAGTGTATAAAGAAATTGTTGGAAGTGCATACTATGTGGCTCCTGAGGTGCTAAAACGGAATTATGGAAAGGAAATAGATGTGTGGAGTGCAGGAGTCATTTTATACATTCTCCTATGTGGGGTGCCTCCATTTTGGGGTGAAACCGAGAGAGGCATATTTGATGCCATTTTGGGAGGTAAGTTAGATCTGGAAAGCGCACCATGGCCCTCTATTTCAGCTGCTGCAAAAGATTTGGTCAGGAAAATGTTGACTTATGACCCTAAGAAACGCATTACAGCTGCTGGTGCACTTGAACACCCATGGATGAAGGAAGGGGGGGAAGCATCTGACAAGCCTATAGACAACGCGGTTTTAAGCAGGATGAAACAATTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTCATAGCACACAACCTTTCAGAGGAAGACATCAAGGGCCTGAAACAAATGTTCAACAATATGGATACAGATCGCAGTGGAACAATCACATTTGAAGAACTCAAATCTGGATTGTCCAGATTGGGATCCAAGCTTTCCGAAACCGAAATAAGGCAGCTAATGGATGCTGCTGACGTTGACAAGAGTGGGACCATAGACTATTATGAATTCATTACTGCCACTATGCATCGGCATAAACTTGAGAAGGAAGAAAATTTGTTTAACGCTTTTCAATACTTTGACAAGGACAACAGCGGTTACATAACAAGAGATGAGCTTAGACAAGCTTTGACTGAATATAAAATGGGAGATGAAGCAACTATTGATGAAGTCATCGATGATGTTGACATTGACAAAGATGGCAAAATAAATTACGAGGAGTTTGTGACTATGATGAGAAAGGGGACCCTGGACAAATGA 1617 0.431 MGHCFTKSNSRSDDDRVPISYQSDFSPPHHHQQLPKRTPHVQQPPPQVPQQPPHHPFHASKSDPTPSSSSSSSYSSEAASIILGKPYVDIKALYTLDKELGRGQSGVTYLCTEKATGRQYACKSIARRKLTRKKEIDDVKREIMILQHLSGQPNIVEFKGAYEDKQHVHVVMELCRGGELFDRIIAKGAYSEREAASIFRQIVNVVHVCHFMGVMHRDFKPENFLMVSKDGNSPLKVTDFGLSVFIEEGKVYKEIVGSAYYVAPEVLKRNYGKEIDVWSAGVILYILLCGVPPFWGETERGIFDAILGGKLDLESAPWPSISAAAKDLVRKMLTYDPKKRITAAGALEHPWMKEGGEASDKPIDNAVLSRMKQFRAMNKMKKLALKVIAHNLSEEDIKGLKQMFNNMDTDRSGTITFEELKSGLSRLGSKLSETEIRQLMDAADVDKSGTIDYYEFITATMHRHKLEKEENLFNAFQYFDKDNSGYITRDELRQALTEYKMGDEATIDEVIDDVDIDKDGKINYEEFVTMMRKGTLDK* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2310 538 Gene3D - 360 534 - -
Dod08g2310 538 PANTHER SERINE/THREONINE-PROTEIN KINASE 55 536 - -
Dod08g2310 538 ProSitePatterns EF-hand calcium-binding domain. 515 527 IPR018247 -
Dod08g2310 538 ProSiteProfiles Protein kinase domain profile. 94 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g2310 538 MobiDBLite consensus disorder prediction 39 53 - -
Dod08g2310 538 Pfam Protein kinase domain 94 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g2310 538 SMART efh_1 471 499 IPR002048 GO:0005509
Dod08g2310 538 SMART efh_1 506 534 IPR002048 GO:0005509
Dod08g2310 538 SMART efh_1 399 427 IPR002048 GO:0005509
Dod08g2310 538 SMART efh_1 435 463 IPR002048 GO:0005509
Dod08g2310 538 ProSiteProfiles EF-hand calcium-binding domain profile. 431 466 IPR002048 GO:0005509
Dod08g2310 538 CDD STKc_CAMK 94 351 - -
Dod08g2310 538 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 55 536 - -
Dod08g2310 538 SUPERFAMILY EF-hand 391 532 IPR011992 -
Dod08g2310 538 ProSitePatterns EF-hand calcium-binding domain. 480 492 IPR018247 -
Dod08g2310 538 SUPERFAMILY Protein kinase-like (PK-like) 94 359 IPR011009 -
Dod08g2310 538 Gene3D Transferase(Phosphotransferase) domain 1 180 359 - -
Dod08g2310 538 Pfam EF-hand domain pair 469 532 IPR002048 GO:0005509
Dod08g2310 538 Pfam EF-hand domain pair 400 460 IPR002048 GO:0005509
Dod08g2310 538 ProSitePatterns EF-hand calcium-binding domain. 408 420 IPR018247 -
Dod08g2310 538 MobiDBLite consensus disorder prediction 1 74 - -
Dod08g2310 538 ProSiteProfiles EF-hand calcium-binding domain profile. 395 430 IPR002048 GO:0005509
Dod08g2310 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Dod08g2310 538 Gene3D Phosphorylase Kinase; domain 1 96 179 - -
Dod08g2310 538 ProSiteProfiles EF-hand calcium-binding domain profile. 467 502 IPR002048 GO:0005509
Dod08g2310 538 ProSitePatterns EF-hand calcium-binding domain. 444 456 IPR018247 -
Dod08g2310 538 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Dod08g2310 538 ProSiteProfiles EF-hand calcium-binding domain profile. 503 537 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2310 Dod-Chr8 51137777 51142580 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2310 4 535 EF-hand Containing Proteins AT4G04720 65.363 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod08g2310 Pkinase 6.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2310 K13412 - rcu:8267831 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2310 08 51137777 51142580 Dod08g2310 08 51137777 51142580 ECH