Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2301 ATGGCACAGACTACACCGAATCACACACAAACCGTATCTGGGTGGGCTGCTCATGATTCTTCTGGCAAGATCACCCCATACACCTTCAAAAGAAGGGAGAACGGCGTGAATGATGTCACCATACAGATCTTGTATTGTGGGATTTGCCACACTGACATCCATTACGTTAAAAATGAATGGGGCATCACTATGTATCCTGTTGTGCCCGGGCACGAGATCATTGGGGTGATAAGCAAGGTGGGGAGCGAAGTGAAGGGGTTCAAAGAAGGAGACAGAGTAGGGGTGGGGTGTTTGGCAGCCTCATGTTTGGATTGTGAGCACTGCAAGAACGGTCAGGAGAACTACTGCGAGCAGTTACAATTCACATACAACGGAGTTTTCTGGGATGGCAGCATCACCTATGGTGGCTACTCCAACATGTTGGTCGCAGATTACAGATATGTGGTACACATTCCGGCAAACCTGCCAATGGACGCAGCGGCACCTTTGCTGTGTGCTGGAATAACAGTGTTCGCTCCTTTGAAAGACCATGATTTGGTAGCCTCACCGGGGAAAAGGATTGGGATTGTGGGCTTGGGGGGCCTCGGGCATATAGCAGTCAAGTTTGCCAAGGCATTCGGCCACCATGTTACCGTCATTAGCACTTCTCCCTCCAAAGAAGCTGAGGCTAAGCACCGTTTGGGAGCTGATGATTTCATAGTCAGCTCCAACCCCAACCAAATGCAGGGTGGGAGGAGAAGCCTGGATTTCATTTTGGACACTGTTTCAGCGGAGCACTCTCTGTTGCCCATCTTGGAACTGCTCAAAGTCAACGGAACTTTGTTCATCGTGGGTGCACCAGACAAGCCACTGCAATTGCCCGCTTTCCCATTGATATTTGGCAAGAGATCAGTGAAAGGTGGGATCATAGGGGGAATAGAAGAAACGCAGGAAATGCTGGACGTTTGTGGGAAGCACAATATCACGTGTGACATTGAGTTGATCACACCAGACAGAATCAACGACGCTCTGGACCGCCTTGCCAAGAATGATGTCCGCTACCGTTTCGTCATTGACATTGCCGCCGACAACACCTCAAATAACTAG 1086 0.4982 MAQTTPNHTQTVSGWAAHDSSGKITPYTFKRRENGVNDVTIQILYCGICHTDIHYVKNEWGITMYPVVPGHEIIGVISKVGSEVKGFKEGDRVGVGCLAASCLDCEHCKNGQENYCEQLQFTYNGVFWDGSITYGGYSNMLVADYRYVVHIPANLPMDAAAPLLCAGITVFAPLKDHDLVASPGKRIGIVGLGGLGHIAVKFAKAFGHHVTVISTSPSKEAEAKHRLGADDFIVSSNPNQMQGGRRSLDFILDTVSAEHSLLPILELLKVNGTLFIVGAPDKPLQLPAFPLIFGKRSVKGGIIGGIEETQEMLDVCGKHNITCDIELITPDRINDALDRLAKNDVRYRFVIDIAADNTSNN* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2301 361 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Dod08g2301 361 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Dod08g2301 361 Gene3D - 166 323 - -
Dod08g2301 361 PANTHER ALDEHYDE REDUCTASE 1 356 - -
Dod08g2301 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Dod08g2301 361 Gene3D - 15 353 - -
Dod08g2301 361 CDD CAD1 14 352 - -
Dod08g2301 361 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 356 - -
Dod08g2301 361 SUPERFAMILY GroES-like 17 177 IPR011032 -
Dod08g2301 361 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Dod08g2301 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2301 Dod-Chr8 51069357 51073879 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2301 14 354 Monolignol Biosynthesis Gene Families AT2G21730 57.895 2.21e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2301 K00083 - gmx:100820588 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2301 08 51069357 51073879 Dod08g2301 08 51069357 51073879 ECH