Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2296 ATGTATATGGTTCTTCTTTTCATGAAGCACCATTCTTCTCATCCACCTTCTCTTCCAACCTCAAATATTTGTACTTCAATGCTCCTCCGTTTCATATTATTATTATTAGCTATTTGTTGCAAAACAAAAGCTCTTGTGAAACTGCCACCAAATGTTTCGGTTCCAGCAGTGTTTGTGTTTGGAGACTCGATCATGGATACGGGAAACAACAACAACAACAAGTATACAGAAGCAAGGTGCAATTACCCACCATACGGAAAAGACTTTGTAGGAGGGAAACCAACTGGCCGATTTAGCAATGGAAAAGTGCCATCAGACCTTGTAGCTGAAGAATTAGGCATAAAAGAGTTTCTACCGGCATACTTGGATCCAAATCTCCAACCAAGTGAATTGGCCACTGGTGTGTGCTTTGCATCCGGTGGCGCCGGATACGACCCTTTGACATCTAGTGTCGCGTCGGCTATACCGTTATCGTCTCAAATAGACATGTTCAGAGAATACATAGGAAAGCTAAGACGACTCGTTGGGGAGGACAGCACAAACTTCATACTAGGCAACAGTTTTTTCCTCGTGGTGTTGGGCAGCAATGACATTTCCAACACATACTTTCTGTCCCATGTTAGAGAGGTGCAATATCATTATGATTTTCCTGCTTACGCTGACCTTATTGTCCGCTTCGCATCTGATTCCGTAAAGGAAATCTATCAACTAGGTGCACGAAGGATTGGAGTATTCAGTGCACCGCCAATTGGGTGTGTGCCGTTTCAGAGAACAGTGGCAGGAGGAATAGCAAGAAACTGTGTTGAAAAGTACGACGATGCAGTGCAGTTATTTAACACTAAACTGTCAAAGGAGCTGGATTCCATTAACCAGGCTCTTCCAGATAGCAGGGTTTTCTACATTGATGTTTACAACCCTCTACTTGATATTATTGTAAACTACCAAAAATATGGCTATAAAGTTGGAGACAGAGGGTGCTGTGGCACTGGCAAAATAGAGGTTACATTTTTATGCAACCATTTGGAAACCACATGTTCCAACGTTTTGGATTATGTTTTTTGGGACAGTTTTCACCCTACTGAATCTGTTTACAGAAAGCTTGTGGTTACTGTTCTAACAAAATATGTGCAGCAATTCTGA 1140 0.4193 MYMVLLFMKHHSSHPPSLPTSNICTSMLLRFILLLLAICCKTKALVKLPPNVSVPAVFVFGDSIMDTGNNNNNKYTEARCNYPPYGKDFVGGKPTGRFSNGKVPSDLVAEELGIKEFLPAYLDPNLQPSELATGVCFASGGAGYDPLTSSVASAIPLSSQIDMFREYIGKLRRLVGEDSTNFILGNSFFLVVLGSNDISNTYFLSHVREVQYHYDFPAYADLIVRFASDSVKEIYQLGARRIGVFSAPPIGCVPFQRTVAGGIARNCVEKYDDAVQLFNTKLSKELDSINQALPDSRVFYIDVYNPLLDIIVNYQKYGYKVGDRGCCGTGKIEVTFLCNHLETTCSNVLDYVFWDSFHPTESVYRKLVVTVLTKYVQQF* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2296 379 PANTHER GDSL ESTERASE/LIPASE EXL3 30 376 - -
Dod08g2296 379 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 57 68 IPR008265 GO:0006629|GO:0016298
Dod08g2296 379 Pfam GDSL-like Lipase/Acylhydrolase 57 367 IPR001087 GO:0016788
Dod08g2296 379 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 30 376 - -
Dod08g2296 379 SUPERFAMILY SGNH hydrolase 56 370 - -
Dod08g2296 379 CDD SGNH_plant_lipase_like 55 375 IPR035669 -
Dod08g2296 379 Gene3D SGNH hydrolase 47 376 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2296 Dod-Chr8 51008269 51013779 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2296 51 377 Pollen Coat Proteome AT1G75910 38.298 1.04e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2296 - - mtr:MTR_1g025680 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2296 08 51008269 51013779 Dod08g2296 08 51008269 51013779 ECH
Dod09g2297 09 44232687 44235555 Dod08g2296 08 51008269 51013779 PCT