Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2286 ATGACTCTCGAAGACTTCTTTACCTTGACTGAGATGAAAGATGGGCTCACAGTCCCTTCCCGAGTGCAGGAGTTGATCTCTGTAATGCAAAAGGAGCAAGATTGTGATGTTAAGAATGCTGGTGATGTAACAAGGCAGTGGGCCGCTGTTGCAAGCACCATTGCTGCTACAGAGAATAAAGATTGTCTTGATCTTTTTATTCAATTAGATGGACTTTGGTTCATCAATAGATGGTTAAACGATGCTCAGAATTTTGTTGCTGATGCAAATGATGGCTTCCTTGAAGAGTCAATCACTTCAATGTTAAGAGCAGTTGAAAAACTGCATTTAGACAGCAAGAAGTCAATTTCATCAGGAATTCAGGTAGCTGTAAATAAACTTCTTGGCCATCATAGCTCCAGGGTTCAGGATAGAGCAAGACTATTATGTGACAGCTGGGAACGAGGTGAACATGGTAATGGTGAACCTCATGATATGGATCTTGATAGAGTCGACAAATCGAGTGATAAGATTGTCATTGAGGAAGGCCAGCCTTCTGCTGTGAATGAAGCTGGCAATAACGATGGTCATGCCTCAGGAATTGTTGTAGTTGAGAAGTCTCAAGTGAGAAGCTCAGATAGCCTGCTACCAGAAAAGGTTACTTGTGAACAGCTACAGAGTTTTGATCATACCCTCCAGTCCTCTGCAAGTTTGGATTGTGAAGACACCAAAGAGACATCAAACCAGCTTTCAAGTGTTTTGACTTCTGTTAAAGAAGTTTCTCTCATTAGCGAAGCTACATCAGCTGAGACCTGTAACTCCCCTGTTCAAAAACAAAGCAGCTTCAAAGGAGAACAAGATGATTTACAGTTAAATGACTCATCCAAAGAGGAGAAGCAAGAACAAAATGATAATGGCCCCCAAGAAAATTTAAGAACACCAGATATCTCTTTGTCTTCCACAATGCCAGAGCCGGGACCTGTTTCTGTTGGTGCTTGTGAAACAACAGCACTTGAATCCATGAAAGAACCTGCTTTAGAACATAATGTTGAAAATAATGAGAATGGTGATCGTCATAAAACAACTGTTTCTTGTAATATGAGAACATCTGCATCTGATAGAGAAAGTGGGGTGGATGATGTCAGTGCTATGAATCCTACCAATCCAAAACCTTTCAAAGCTTCAGAAAACAATGATGTATGTTGCCCTAATGTGTTGCAGGGCTCATCAGTCAGTGGCAGAAACTTGGGAAAGTCTGAGGTGTTAGAGATGCCTTTTCGTAAAACAGAATATGTCAGAGCATTAAAGGAGGGCAAGGGCCAAGTTTCTAAGAAAGGGAATGATGCATTGAATGATTCTGATTCTTTTAAAAGGGGAAATGTTCCCAGAAGGCCTAAACTTATTGACAAGAGTTCTGACATTGAAATTGAGTATGGCATTGTTGATACTTTAGAAGTTGCTAAGGAAAAGGGCCAAGTTTCTAGTCAAGGCGGTGATGCTTCAAATGGTTCTGATTCTTTGAGAAGGGGGAGAAGGCCCAGAAGCCCCAACATTATTGACAAGAGTTCTGACATTGAACTCGAGTATGGCATTGATGATGCTTTAGCAGTTGCTCGACAAGTGGCACAGGAAGTTGAGAGAGAAGCCCGGAGCTCATCTTCAGAGAAAATTTCAGGAGGAGTCAGGCAGCCAGGCAGCCCAGATTCTGTTGGCAAAAAGAATGAACTCACTCATGATCTGCCTGAGGAGGTATCATCAAGGCAAGGCAACTCTGCTGAGGCAAGTTCTGAAGAGGAGAGGCAAATTAGTTATTCAGACAATATTGTGGCTGAACCAGAATGCATACCTGACTTGGAGTCCTCGCAGGTGACTGAAGCAGCTCGTGATCCAGGAGGTAATTCAGAGAAAAGCCTATGTAATTTTGATTTGAATGAAGAAGTTGGTTCTGATGATTTGGGTGTTTCTGTAAATGCCAAGTCTGTTACACCAATACCTGTTGTCTCTGCTTCAAAGCCTCCACAGACTTCTATGTTGCCCACTGCCCCTTTGCAGTTTGAGGGGACGCTTGGATGGAAAGGATCAGCTGCCACCAGTGCCTTTCGTCCTGCATCACCTCGTAAAAATTCTGATAGCGAGAAGAATGTTTCTGTTGGTGGGAACTCTGACATTTCCAGGCAGAGGCAGGATTGCCTCGATTTTGATCTGAATGTGATGGAGGGTGGTGAAGAATTGTTAAAACAAATTGGTGAATCTTCAAGCCTACCTTCTGGGCAATCATCAGTAGAACTTAGTCCTAAACGATCAAGCAGGCTTGAATTGGATTTAAACAGTATTGGTGATGATGATGATACCCAACCTTCAGATCGTAGGATGGAGGAGCAACTGTTTCCTGGAAGAAATGGCTATTGGAGCCCATCACCTGCGTCATCATCGTCATCAATGCAGCCTTCCATTCGAAACATTGATTTGAATGACAGGCCATATTTTCAGACTGATTTGGTGGAACAAGGGCCTATTAAGTCTTCTACTATGGATTTATACGGAAGCTCTAAACCAGATGCTCCTGTGATCTCTATTTTGGGTGCCAAGGTGGAAGTTGGTAGAAGAGAACATGTTCCTCAAACTTTGTCTTTGCCAAATGGCAAGGCTATTGAGCCCGCAATTGATCTTGCAATGTCAGGAACAGGTGGCATTTTAGGCATGACCCCCTCGGCTTCCTACAATAATTCAGCTGTTTTCGGGTATAGTGGACTGACATCAGCGTCCCCTTTAACATTTTCGCCAACCATGTATGGATCTGGTGCTGCAATTCCGTACATGATGGACTCAAGAGGAGCTCCAGTTGTGCCTCAAGTTGGGGGATCTTCCTCAACTGTTCCATCATCATACCATCAGCACCCGTTTGTCATGAGCATGACCGGTACACAGCGCAGTTTAAATGGAGTTGGCCCTTCGCGTCCCAACTTCAATCTAAACTCTGGCTTCATGATTGATGGGGTGCATAGAGATACATTGGCTGCACGGCAATTTTTCTTTCCTTCTCCGGGTAGACCTATGGAGGAGCAACCAATGGCCATTCCACAATCCTCCAGTTCTGGGGTTGGTGGGAAAAGAAAGGAACCAGACAGTGGTTGGGAGCCTTATCCATTTAGCTACAAAAATCCTCAACCTCCATGGAAGTAG 3162 0.4364 MTLEDFFTLTEMKDGLTVPSRVQELISVMQKEQDCDVKNAGDVTRQWAAVASTIAATENKDCLDLFIQLDGLWFINRWLNDAQNFVADANDGFLEESITSMLRAVEKLHLDSKKSISSGIQVAVNKLLGHHSSRVQDRARLLCDSWERGEHGNGEPHDMDLDRVDKSSDKIVIEEGQPSAVNEAGNNDGHASGIVVVEKSQVRSSDSLLPEKVTCEQLQSFDHTLQSSASLDCEDTKETSNQLSSVLTSVKEVSLISEATSAETCNSPVQKQSSFKGEQDDLQLNDSSKEEKQEQNDNGPQENLRTPDISLSSTMPEPGPVSVGACETTALESMKEPALEHNVENNENGDRHKTTVSCNMRTSASDRESGVDDVSAMNPTNPKPFKASENNDVCCPNVLQGSSVSGRNLGKSEVLEMPFRKTEYVRALKEGKGQVSKKGNDALNDSDSFKRGNVPRRPKLIDKSSDIEIEYGIVDTLEVAKEKGQVSSQGGDASNGSDSLRRGRRPRSPNIIDKSSDIELEYGIDDALAVARQVAQEVEREARSSSSEKISGGVRQPGSPDSVGKKNELTHDLPEEVSSRQGNSAEASSEEERQISYSDNIVAEPECIPDLESSQVTEAARDPGGNSEKSLCNFDLNEEVGSDDLGVSVNAKSVTPIPVVSASKPPQTSMLPTAPLQFEGTLGWKGSAATSAFRPASPRKNSDSEKNVSVGGNSDISRQRQDCLDFDLNVMEGGEELLKQIGESSSLPSGQSSVELSPKRSSRLELDLNSIGDDDDTQPSDRRMEEQLFPGRNGYWSPSPASSSSSMQPSIRNIDLNDRPYFQTDLVEQGPIKSSTMDLYGSSKPDAPVISILGAKVEVGRREHVPQTLSLPNGKAIEPAIDLAMSGTGGILGMTPSASYNNSAVFGYSGLTSASPLTFSPTMYGSGAAIPYMMDSRGAPVVPQVGGSSSTVPSSYHQHPFVMSMTGTQRSLNGVGPSRPNFNLNSGFMIDGVHRDTLAARQFFFPSPGRPMEEQPMAIPQSSSSGVGGKRKEPDSGWEPYPFSYKNPQPPWK* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2286 1053 MobiDBLite consensus disorder prediction 694 719 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 760 781 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 533 635 - -
Dod08g2286 1053 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 1 481 - -
Dod08g2286 1053 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 482 1053 - -
Dod08g2286 1053 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 482 1053 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 576 596 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 262 324 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 742 781 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 498 518 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 431 457 - -
Dod08g2286 1053 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 481 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 299 317 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 1005 1053 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 689 721 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 789 808 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 742 759 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 262 281 - -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 482 518 - -
Dod08g2286 1053 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 148 IPR035441 -
Dod08g2286 1053 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 16 150 IPR035441 -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 282 298 - -
Dod08g2286 1053 Pfam TFIIS helical bundle-like domain 101 147 IPR017923 -
Dod08g2286 1053 MobiDBLite consensus disorder prediction 362 389 - -
Dod08g2286 1053 ProSiteProfiles TFIIS N-terminal domain profile. 80 153 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2286 Dod-Chr8 50898776 50903904 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Dod08g2286 Med26 0.00012 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2286 - - adu:107479123 1326.61