Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2267 ATGGCTCTTAGAAAATCAAGTAGGCTTCCTCAAACACCACTCCTCAAGCAAATTCTCAAGAGGTGCTCAAGTCTGGGGAAGAAACAAGGCTATGATAATGATGTCCCAAAAGGACACTTTGTTGTGTATGTTGGAGAGAATAGAAGCAGGTACATTGTACCAATCTCTATTCTAAGGTGCCCCGGGTTCCTAACCTTGCTCCATCGAGCAGAAGAAGAGTTTGGCTTTGATCATGAAGGGGGTCTCACTATCCCTTGTGATGAAGATGTTTTTGAGTCTCTTATTACATCCATTTAG 297 0.4276 MALRKSSRLPQTPLLKQILKRCSSLGKKQGYDNDVPKGHFVVYVGENRSRYIVPISILRCPGFLTLLHRAEEEFGFDHEGGLTIPCDEDVFESLITSI* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2267 98 Pfam Auxin responsive protein 24 97 IPR003676 GO:0009733
Dod08g2267 98 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 95 - -
Dod08g2267 98 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2267 Dod-Chr8 50623475 50623955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2267 14 96 Calmodulin-binding Proteins AT4G34750 46.988 5.74e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2267 K14488 - gmx:100305700 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0477 02 6247985 6248652 Dod08g2267 08 50623475 50623955 ECH
Dod08g2267 08 50623475 50623955 Dod02g0477 02 6247985 6248652 ECH
Dod08g2267 08 50623475 50623955 Dod08g2267 08 50623475 50623955 ECH