Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2263 ATGCCGGTAACCAAATGCAGCAAGATTCGCCACATTGTGCGTCTCCGCCAGATGCTGCGTCGCTGGCGCACCAAGGCCCGCATGTCCGCGAGCCGCTCCTCTTCTTCCCTACCGTCCGATGTTCCCGCTGGACACGTGGCGGTTTGCGTGGGCACCAACCACACCAGATTCATCGTGCGCGCGACGCACCTGAACCACCCCGTCTTCAAGAGCCTCCTAGTGCAAGCCGAGGAAGAGTACGGTTTCACGAACCACGGTCCCTTGGCGATCCCCTGCGACGAAAGCGTGTTCGAGGAGGTTATCCGGTTCATTTCCCGGTCCGAGAATAGTAACGGTTCGAACCGGTTCCTGAACCTCGAGGATTTCCAGAGGTACTGCCACGTAGACCTCAGGAACAACCTTGATTTCTGGCCTGAATATCGACCGTTGCTTCACGGGTTCGCTGACAAGACCATTTGGTAG 462 0.5779 MPVTKCSKIRHIVRLRQMLRRWRTKARMSASRSSSSLPSDVPAGHVAVCVGTNHTRFIVRATHLNHPVFKSLLVQAEEEYGFTNHGPLAIPCDESVFEEVIRFISRSENSNGSNRFLNLEDFQRYCHVDLRNNLDFWPEYRPLLHGFADKTIW* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2263 153 PANTHER SMALL AUXIN-UP RNA-RELATED 5 146 - -
Dod08g2263 153 Pfam Auxin responsive protein 14 103 IPR003676 GO:0009733
Dod08g2263 153 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 146 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2263 Dod-Chr8 50534802 50536072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2263 3 152 Calmodulin-binding Proteins AT4G34750 51.613 1.40e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2263 K14488 - qsu:112012151 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2263 08 50534802 50536072 Dod08g2263 08 50534802 50536072 ECH