Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2254 ATGGTTAAATCTAGCTCCTGCTTCAAACTAATCACTTGCGGTGGTGGTGATTCTGGAGACAAAGATAATGCTGATTACCAACCAATATCTGAGAACAAGGATTCTAACGATAAGCGTGGCTGGAGTTTCCGGAAGAGGTCTGCAAGGCACCGTGTGCTTAGCAATACTGTGATAACAGAGACCCCATCTTCAGCAAATAAGGAGAGTTCAGAATCTACAAGTATTAATTTTCAACCGGCTGCTGAACCTGATGCTGTTGAGAAGATATATACAACAAATGTGTCTGACGAGAAGCCCCAGTTATCCTCCTTGGAAAGCTCACAAATACCAGAAACAATTGTGACTGAAACTGAGACTAAGGTGGATGTCAGTCCACCCAAGTCTGTTGTTATCGTCATCCAGGCTGCCATTAGAGGGTTCTTGGCTCAGAGAACATTGCTAAAGAATAAGAATGCAGTGAAGTTGCAAGCTGCTGTTCGTGGTCACTTGGTCAGGAGGCATGCTGTAGGAACCCTGCGTTGTGTTCAAGCTGTTGTTAAAATGCAGGCCCTTGTGAGAGCTCGACACGCTCAGCAGGCACATTCAGAAAACCATATAAATCACAAGGGTAATGAACATCATGTGACCAAATCGAATGTGGCACACACTTCTATAGAGAAGCTACTAAGCAACAGATTTGCTCGTCAGCTGTTGGACTCCACACCAAAGAACAAACCTATCCATGTCAAATGTGACCCTTTGAAAGGTGATTCAGCTTGGAAATGGTTGGAGAGATGGATGTCAGTTTCATCAGCAGATTCTGCAGAGCACAAAAAAGAAGTTTGCGTGTCAGAACAATCAGACAAAACCAAAGAGAACACTTCTGTTTCTGAATTGCAAACAGGTATTTCAACAGAAGTTTCTCTTCAGTCAGCTGACTCAAAGCCTGCTGTTAGGGAGTCACCTCCGCCTTCTGAAGATGAAGAGAAGACAATTGCTTATGATGCTAATGACTTCAACTTTGAAGCAAGCCCCTCTTCATCTTCTCTCATAAAAGATAACTTTGAAGCAAGCCCCTCTACATCTTCTCTCGTAAAAGATAACATGGAAGAGGCTCCTGAAAAGACTACTATACATGATACTAAAGTAATCTCAACTGAAATTGATTCTTTCGAAGAAAAAATAACAGAATCAGATGCAAGTGTCCTGCAGGAGCCTAGTTCTATTGATCAGAAGCCTGGAATTGATGGTGAACAGGACAACCAATCTATGAAAAGATCCGCCTCAGACCAACTAGAGGCTGAGGGAAAGAAATTTGCACATGGTTCAAGGAAGACCAGTAATCCTGCATTTGTTGCTGCCCACTCAAAATTTGAAGACCTGACTTCAATGGCAAATTCAGGTAAGTCAAGCAGTTTGTCCAATCAAGATGCACCATTTGAATCACAAGCAGCCACCCCTTCTATTGCCCCCGAAACTGCAGATAGATCAAAAGAGTTCTTCTCATCTGAGAATGCTGCTACCTATCCTTCCATAATTCTTGGTTCTGAATGTGGCACTGAACTCTCGATTACTTCCACTCTTGATTCACCTGATGGATCAGAGGTTGGGACTAAGGAAAGTGAGCATGATGCCAAAGATTTGGTAGAAGGGAGGGATAATCCTGAAATCAAGATAGATCATGGTCTTGAGGCCAATAATATTGTGCAGGCTGTTTCGACTGCTAACTTACCAAACTCTAATTTGAATAAATTAGAGACTGCTGATGGCACCAGTGGCAATATGAATCATTCAGAGATAGTTGGGAACTCCAAAGAGGATGCTGTTAACTCTGAGCAAAATGCATCTGACCTATTGAGAGAACCGGAAGAGGCTGCTCAGCAAGATTCTAAGCTGTCTCCAGGAGCTTCACCAAGTAGTCAGCAATATCAACTAGGAACACCTTCTAGTCAAGTATCCATGACCATCCCTGAGTCACAAGAAACCCCTTCAAGTCAGGTATCCATCAAATCTAAAGAGAGCAAAATCAACAAGACTGGATCCAGCAATAAGCGTAAAATCCTGTCTGCGGGTAACAAATCTCCTGCAAATGCTAATCATGATTCAGGCTCAAGAGGTAGTAGGGAACAACCGCCTAAAGATCAACCGAGTGGAAAGAGACGCAGTTCCTTTGGCTCAGTAAAATCTGATCACATTGATCAAGAAGCTGGAGATAATAGTAGCAACAATAGTTCTCTTCCCCATTTCATGCAAGCTACAGAATCTGCTAGGGCCAAGATGAATGCGAATAACTCTCCAAGATCAAGTCCAGATGTGCATGACCAAGACATCCTAGTTAAGAAGAGACATTCCTTACCCGGTGCTACTGGTAGGCAGGGTTCTCCGCGCATCCAACAATCACCGCAGCAGAGCACAAAGGGCAATGGTGTGCATGTTCATCATGGTGCACATACATGCACGCATGTCCACGCTTTCTAG 2457 0.4343 MVKSSSCFKLITCGGGDSGDKDNADYQPISENKDSNDKRGWSFRKRSARHRVLSNTVITETPSSANKESSESTSINFQPAAEPDAVEKIYTTNVSDEKPQLSSLESSQIPETIVTETETKVDVSPPKSVVIVIQAAIRGFLAQRTLLKNKNAVKLQAAVRGHLVRRHAVGTLRCVQAVVKMQALVRARHAQQAHSENHINHKGNEHHVTKSNVAHTSIEKLLSNRFARQLLDSTPKNKPIHVKCDPLKGDSAWKWLERWMSVSSADSAEHKKEVCVSEQSDKTKENTSVSELQTGISTEVSLQSADSKPAVRESPPPSEDEEKTIAYDANDFNFEASPSSSSLIKDNFEASPSTSSLVKDNMEEAPEKTTIHDTKVISTEIDSFEEKITESDASVLQEPSSIDQKPGIDGEQDNQSMKRSASDQLEAEGKKFAHGSRKTSNPAFVAAHSKFEDLTSMANSGKSSSLSNQDAPFESQAATPSIAPETADRSKEFFSSENAATYPSIILGSECGTELSITSTLDSPDGSEVGTKESEHDAKDLVEGRDNPEIKIDHGLEANNIVQAVSTANLPNSNLNKLETADGTSGNMNHSEIVGNSKEDAVNSEQNASDLLREPEEAAQQDSKLSPGASPSSQQYQLGTPSSQVSMTIPESQETPSSQVSIKSKESKINKTGSSNKRKILSAGNKSPANANHDSGSRGSREQPPKDQPSGKRRSSFGSVKSDHIDQEAGDNSSNNSSLPHFMQATESARAKMNANNSPRSSPDVHDQDILVKKRHSLPGATGRQGSPRIQQSPQQSTKGNGVHVHHGAHTCTHVHAF* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2254 818 MobiDBLite consensus disorder prediction 15 45 - -
Dod08g2254 818 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Dod08g2254 818 SMART iq_5 125 147 IPR000048 GO:0005515
Dod08g2254 818 SMART iq_5 148 169 IPR000048 GO:0005515
Dod08g2254 818 Pfam Protein of unknown function (DUF4005) 704 798 IPR025064 -
Dod08g2254 818 ProSiteProfiles IQ motif profile. 148 177 IPR000048 GO:0005515
Dod08g2254 818 MobiDBLite consensus disorder prediction 457 483 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 281 308 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 276 322 - -
Dod08g2254 818 Gene3D - 127 167 - -
Dod08g2254 818 PANTHER IQ-DOMAIN 5-RELATED 1 805 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 338 368 - -
Dod08g2254 818 PANTHER PROTEIN IQ-DOMAIN 32 1 805 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 24 42 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 57 78 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 388 444 - -
Dod08g2254 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 192 IPR027417 -
Dod08g2254 818 MobiDBLite consensus disorder prediction 516 553 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 623 698 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 528 553 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 457 495 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 570 806 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 570 609 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 393 422 - -
Dod08g2254 818 Pfam IQ calmodulin-binding motif 150 167 IPR000048 GO:0005515
Dod08g2254 818 Pfam IQ calmodulin-binding motif 130 145 IPR000048 GO:0005515
Dod08g2254 818 MobiDBLite consensus disorder prediction 784 802 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 729 764 - -
Dod08g2254 818 MobiDBLite consensus disorder prediction 338 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2254 Dod-Chr8 50339064 50345805 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2254 116 800 IQD Protein Family AT1G19870 36.115 2.90e-100 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2254 - - aip:107645297 1083.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2254 08 50339064 50345805 Dod08g2254 08 50339064 50345805 ECH