Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2251 ATGGATGATGCTGGGCATCGTGAAAATGGAAGGCACAAAGCAGATCAATATAAATCTTCTCAGGGACAGTGGTTGATGCAACACCAGCCTTCCATGAAGCAGATTATGGCTATTATGGCTGAAAGAGATGCAGCCATTCAAGAAAGAAACTTGGCCCTTTCTGAGAAAAAGGCGGCACTTGCAGAGCGAGACATGGCATTCATACAGCGAGATGCTGCAATTGCGGAAAGAAATAATGCATTAATGGAACGTGATAATGCAATTGCAACACTTCAATTTCGAGAAAACACCCTAGCCAACAGTAGTATGTCCTCATGCCCTCCAGGTTGCCAAATTGCACGAGGCATCAAGCATTTGCATCATCCGCAGCAACAGGTACACCATTTACCTAATATGGGTGATCCTTCTTACAGCACCCGAGAAATGCACACTAGTGATTCCCTCCCAGCAGTGCCTATTCCTTCAGAGTCTGGGAAGTCACGGCGAGCCAAACGACCAAAGGAAGCGAAGTCAGTTTCACCTAATAAGAAGACTTCAAAAGCTACTAGAAAGGTGAAGAAGGAGAGCGAAGACCCGAATAAGATGATATTTGGCAAGTCGAATGAGTGGAAGAGCAGTCAGGAAATAATGAATGGGGGTGATGATCTTAACAAGCAATTAATGGTGTCAAAGGCTGATTGGAAAGGCCAGGACTTGGCATTGAACCAAGTTGCGTACGATGAGTCAACCATGCCAGCACCGGGTTGCTCTTGTACTGGTGTTATGAGGCAGTGCTACAAATGGGGTAATGGGGGTTGGCAGTCTGCTTGTTGCACAACCACCCTATCAGTGTATCCACTTCCAGCAGTGCCAAACAAGAGGCATGCTCGGATAGGTGGACGAAAAATGAGTGGAAGTGCTTTCAATAAGCTACTTAGCCGGCTTGCAGCAGAAGGGCATGATCTCTCAAACTCAGTTGACCTTAAGGACCACTGGGCCAAACATGGTACAAATCGGTACATCACAATAAAGTAG 1014 0.4625 MDDAGHRENGRHKADQYKSSQGQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKKAALAERDMAFIQRDAAIAERNNALMERDNAIATLQFRENTLANSSMSSCPPGCQIARGIKHLHHPQQQVHHLPNMGDPSYSTREMHTSDSLPAVPIPSESGKSRRAKRPKEAKSVSPNKKTSKATRKVKKESEDPNKMIFGKSNEWKSSQEIMNGGDDLNKQLMVSKADWKGQDLALNQVAYDESTMPAPGCSCTGVMRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHARIGGRKMSGSAFNKLLSRLAAEGHDLSNSVDLKDHWAKHGTNRYITIK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2251 337 PANTHER PROTEIN BASIC PENTACYSTEINE6 206 337 - -
Dod08g2251 337 PANTHER PROTEIN BASIC PENTACYSTEINE6 1 207 - -
Dod08g2251 337 PANTHER - 206 337 IPR010409 -
Dod08g2251 337 PANTHER - 1 207 IPR010409 -
Dod08g2251 337 MobiDBLite consensus disorder prediction 158 174 - -
Dod08g2251 337 MobiDBLite consensus disorder prediction 1 15 - -
Dod08g2251 337 SMART GAGA_bind_2 1 337 IPR010409 -
Dod08g2251 337 Coils Coil 58 78 - -
Dod08g2251 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
Dod08g2251 337 MobiDBLite consensus disorder prediction 121 197 - -
Dod08g2251 337 MobiDBLite consensus disorder prediction 183 197 - -
Dod08g2251 337 MobiDBLite consensus disorder prediction 1 23 - -
Dod08g2251 337 MobiDBLite consensus disorder prediction 129 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2251 Dod-Chr8 50311777 50315620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2251 65 337 BBR or BPC Transcription factor family AT5G42520 61.938 1.74e-115 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Dod08g2251 GAGA_bind 6.7e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2251 - - gmx:100783502 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2251 08 50311777 50315620 Dod08g2251 08 50311777 50315620 ECH