Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2246 ATGAATTTTATACGGATTATTTTGATCGAGACTTACAAATCTTGGGGATCAATTTTGAGGGGCTGCAAGAAAATCTGCCCCTACAACCGGTGGAGTGAAGAAGCCTCACCGCTATCGCCTTGGAACCGCTGCCCTGCGGAAAATGGGGGTACCGGATCAAGTCCTTATATTGAAAGGAGAACATTTGTTTTTGGGCTGTGTTACCTTGTTTGCTTTGATGTAATTAAGACGGATTTGAGATTCCAGAGCCATGCAGTTCTTCCTCTTCAGGAGGCTGCGGAGGCTTACTTGGTAGGTTTGTTTGAGGACACCAACTTGTGTGCTATCCATGCAAAGAGGGTTACCATAATGGCCAAGGACATTCAGCTTACTCGGCGTATCCGTGGTGAGCGTGCTTAG 399 0.4662 MNFIRIILIETYKSWGSILRGCKKICPYNRWSEEASPLSPWNRCPAENGGTGSSPYIERRTFVFGLCYLVCFDVIKTDLRFQSHAVLPLQEAAEAYLVGLFEDTNLCAIHAKRVTIMAKDIQLTRRIRGERA* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2246 132 SUPERFAMILY Histone-fold 52 129 IPR009072 GO:0046982
Dod08g2246 132 PANTHER HISTONE H3 75 132 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod08g2246 132 Pfam Core histone H2A/H2B/H3/H4 75 128 IPR007125 GO:0003677
Dod08g2246 132 SMART h35 42 132 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod08g2246 132 PANTHER HISTONE H3.3 75 132 - -
Dod08g2246 132 Gene3D Histone, subunit A 59 132 IPR009072 GO:0046982
Dod08g2246 132 PRINTS Histone H3 signature 110 131 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod08g2246 132 PRINTS Histone H3 signature 76 94 IPR000164 GO:0000786|GO:0003677|GO:0030527
Dod08g2246 132 PRINTS Histone H3 signature 94 110 IPR000164 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2246 Dod-Chr8 50285110 50286743 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2246 K11253 - osa:4336000 109.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2246 08 50285110 50286743 Dod08g2246 08 50285110 50286743 ECH
Dod02g0485 02 6354351 6356013 Dod08g2246 08 50285110 50286743 ECH