Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2185 ATGGCCTCAAGCTCAGCTTGGACATCAAAGCAGAACAAAAGATTTGAGAATGCTTTGGCCATCTACGACAAGGACACGCCGGATCGGTGGCAGAACCTCGCGAGGGCCGTCGGAGGGAAGACGGTGGAGGAAGTGAAGAGACATTATGAGATGCTGGTGGAAGATTTGAAGCAGATTGAGGAAGGCCATGTTCCCTTGCCCAATTACAGGAATGCTTCAAATAATGCAACAATTGAAGGCACCAATGTCAGAGGTTGCAATTATATGGAAGAAGAAAGAAGGCTGAAGGCTCTTAGCCTCCAGTGA 306 0.4837 MASSSAWTSKQNKRFENALAIYDKDTPDRWQNLARAVGGKTVEEVKRHYEMLVEDLKQIEEGHVPLPNYRNASNNATIEGTNVRGCNYMEEERRLKALSLQ* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2185 101 Gene3D - 1 66 - -
Dod08g2185 101 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 101 IPR044636 GO:0003700
Dod08g2185 101 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Dod08g2185 101 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Dod08g2185 101 SUPERFAMILY Homeodomain-like 7 60 IPR009057 -
Dod08g2185 101 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 101 - -
Dod08g2185 101 CDD SANT 6 53 IPR001005 -
Dod08g2185 101 Coils Coil 42 62 - -
Dod08g2185 101 SMART sant 3 55 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2185 Dod-Chr8 49602041 49603074 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod08g2185 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2185 - - gmx:100804049 167.162