Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2183 ATGCTTCCGGTTTTGTGCTCAATGGGTCTATCCCTGATTGGTTTGGTGATAAAAATAAGCCTTGGTGCACTCCAAGTGCTTGATTTAAGGTCTTGTTATGTAACTGGTTCTATTCCTGAGTCAATTGGGGGTTTGAGTGTGTTGAAAAGTTTGTTACTTTCTGGGAATAGTTTAACTGGCAGAATGCCTTCAAGTTTGGGAATGTTGAGCGGTTTAGGTGAGCTCGATCTTTCTGGAAATGACCTTTCTGGCCCTGTTCCAAGTTTTTTGTCCTCACTTGGGAACCTCACAAAACTTGATCTTTCCTCGAATTTCATATCTGGGTCTGTTCCACCTGAATTGGTTACCCTCTCGAGTCTTGAAGTTTTGAACCTTTCTAACAATGTGCTAAGTGGTTCTGTTCCCTCTAAGATTGGTAACCTTTCTAGGTTGGTTGAGGTTGATCTTAGCATGAATTCTATGTCTGGTTCATTGCCTGAGAGTTTGTTTTCTGGCCTTCTGAAACTTCGAGTTCTGATTCTGAGTGATAACGCTTTTGTTGGTGCTCTTCCTGCTACTTTTTGGTCGTTGCCAAGCCTGCGTTTGGTTGATGTTTCCAGCAACAACCTCACGGGTACCCTGTCGATGTTTTCTGGTTTGAATGTTAGTTCTACCGGTGCTGTGTTCAATCTCTCGAACAATATGTTCTATGGAAATCTGAATATTTCGGTTATGAAGTTTGGAATGATTGATTTTTCCAGTAATTATTTGCAAGGTGAGGTGGAAGGTGGTGGTCTTAGTAATCTTAATTTATCTAGGAATTGCTTTCAGATGATTCCAAAGCAGAGGGATTTGACAGAATGTAGAATGTTTTATGCTCAGAGAAATTTGCCCTTTGCGCAATCTGAGTCCGGGAACAACAGAAGACAAGTGATATTCATAGTGGCAGTAATATTTGGTGGGTTTGGCCTTATTGTGCTTCTGGTGTTGATGCTCATACTGGTTTTAAGACGATGTGGTGGTAATAAAAGCTTGGCAGTTCAAACGGGGACCGAAAATAGGGGGGCCATTCCGGAAGGGGAAAGTGCTGCGCCACCTAAGGATCCTGAGTTTGTAGCTGGCGTGGGGGAATCATTTACGTATGAGCAAATGCACAAATTGACTGGTAATTTTGATGAAGCGAATATCATCAAGCACGGTCATTCTGGAGACTTCTATTGGGGAGTATTAGAAAGTGGAGCAACTGTGGTTGTCAAAAGGGTAGATTTAAGTTTATTCAAGAGAGAAGTCATACATTGTGGAATTGGCATTGTTAAGCCAGGTTTCACATGCAAGATTGGTCCCAATCTTGGGGCACTGCTTAGAGAATGA 1350 0.4207 MLPVLCSMGLSLIGLVIKISLGALQVLDLRSCYVTGSIPESIGGLSVLKSLLLSGNSLTGRMPSSLGMLSGLGELDLSGNDLSGPVPSFLSSLGNLTKLDLSSNFISGSVPPELVTLSSLEVLNLSNNVLSGSVPSKIGNLSRLVEVDLSMNSMSGSLPESLFSGLLKLRVLILSDNAFVGALPATFWSLPSLRLVDVSSNNLTGTLSMFSGLNVSSTGAVFNLSNNMFYGNLNISVMKFGMIDFSSNYLQGEVEGGGLSNLNLSRNCFQMIPKQRDLTECRMFYAQRNLPFAQSESGNNRRQVIFIVAVIFGGFGLIVLLVLMLILVLRRCGGNKSLAVQTGTENRGAIPEGESAAPPKDPEFVAGVGESFTYEQMHKLTGNFDEANIIKHGHSGDFYWGVLESGATVVVKRVDLSLFKREVIHCGIGIVKPGFTCKIGPNLGALLRE* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2183 449 Pfam Leucine Rich Repeat 95 114 IPR001611 GO:0005515
Dod08g2183 449 Gene3D Phosphorylase Kinase; domain 1 359 426 - -
Dod08g2183 449 Pfam Leucine rich repeat 24 82 IPR001611 GO:0005515
Dod08g2183 449 Pfam Leucine rich repeat 143 203 IPR001611 GO:0005515
Dod08g2183 449 Gene3D Ribonuclease Inhibitor 165 303 IPR032675 -
Dod08g2183 449 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 18 177 - -
Dod08g2183 449 Gene3D Ribonuclease Inhibitor 16 164 IPR032675 -
Dod08g2183 449 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 183 443 - -
Dod08g2183 449 PANTHER RECEPTOR-LIKE PROTEIN 55 18 177 - -
Dod08g2183 449 PANTHER RECEPTOR-LIKE PROTEIN 55 183 443 - -
Dod08g2183 449 SMART LRR_typ_2 166 189 IPR003591 -
Dod08g2183 449 SMART LRR_typ_2 45 68 IPR003591 -
Dod08g2183 449 SMART LRR_typ_2 141 165 IPR003591 -
Dod08g2183 449 SMART LRR_typ_2 190 212 IPR003591 -
Dod08g2183 449 SMART LRR_typ_2 69 92 IPR003591 -
Dod08g2183 449 SMART LRR_typ_2 93 117 IPR003591 -
Dod08g2183 449 PRINTS Leucine-rich repeat signature 96 109 - -
Dod08g2183 449 PRINTS Leucine-rich repeat signature 117 130 - -
Dod08g2183 449 SUPERFAMILY L domain-like 14 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2183 Dod-Chr8 49585675 49587024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2183 9 422 Miscellaneous Gene Families AT2G16250 38.344 8.93e-82 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2183 - - cam:101513491 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2183 08 49585675 49587024 Dod08g2183 08 49585675 49587024 ECH