Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2182 ATGCCAAATGGAGATTTGGCTACTTCCTTGCACCGAGTCACTGGTGAAGATGGTAAATTGAAGTCCCTCGATTGGATCACGAGATTGAAAATTGCTACAGGAGCTGCCGAAGGCCTAGCTCACCTCCACGAGTGCAGCCCTCCCATTGTTCACAGGGATATCCAAGCCAGCAGTATACTACTTGATGATAAATTTGAAGTGCGGCTTGGAAGTTTGAATGAGGCTACTGCACACGGTGAGCTTCATCAGGGTGTCATCTCCAGGCTTTTTCAGCAAGCCATCGTAAGTTTTGAATTCATTAACAAGGACATTGAGATAAAACATAGCTGTTTTATAATGAATCAATACTAA 351 0.4387 MPNGDLATSLHRVTGEDGKLKSLDWITRLKIATGAAEGLAHLHECSPPIVHRDIQASSILLDDKFEVRLGSLNEATAHGELHQGVISRLFQQAIVSFEFINKDIEIKHSCFIMNQY* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2182 116 Pfam Protein tyrosine and serine/threonine kinase 1 70 IPR001245 GO:0004672|GO:0006468
Dod08g2182 116 PANTHER RECEPTOR-LIKE PROTEIN 55 1 97 - -
Dod08g2182 116 SUPERFAMILY Protein kinase-like (PK-like) 1 72 IPR011009 -
Dod08g2182 116 PANTHER BNAA07G03560D PROTEIN 1 97 - -
Dod08g2182 116 Gene3D Transferase(Phosphotransferase) domain 1 1 91 - -
Dod08g2182 116 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2182 Dod-Chr8 49584844 49585646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2182 1 91 Miscellaneous Gene Families AT2G16250 70.968 2.41e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Dod08g2182 PK_Tyr_Ser-Thr 2.4e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2182 - - gmx:100815313 159.073